Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1814 ATGGGGAAGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAAACTTCAGTCTCATACTCAGAAGCTGATAAGCTGCCGCCACCACCGCCACCACCCGTTCCTCTGCCAGAAGAGATTAAATTAACTGATATTGAAAATGAAATCAGTCATGATCATGATCATGTTGTTGAAGTTGTAACTGCCGTTGAAGCCGATGTCCCTGTTCTTCCTGTTCAGATAGAAACGGTTAGGGTTGAAGCTGCCCGGATTCCTCGTTTTTCCGGCAAACCAAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGTTGGTCAGGTTGAAATTATTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACCAGTACCCTTCGATCTATGCAGACATTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGTTGGAGGAGAATCAGGCTCTGCAGAGACAGCTGTTACAGAAGCATGCGAGAGAGCTTGAGAGTTTGCGGGTGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCTAAGTTATTAAGCAAGTATGAAGCTGCTACGAGGAGAGAAAGAGCACTGGCTTATGCATTTACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCAATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGGCCATTGGAGAACCGTAGCCAGATGGATAAAGAGATGAATGACCATGCATCCCTGAAAAGCTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCAATCTCCAACAGCCAGCCAAAATCCGGGCTCACCTAGCTTTAACTCCACTCCTTCCAAACGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTCAGTGTACAGTCAGATCGGTTCCGGAGGCACTCAATCGCAGGTTCATCTGTGAGAGATGACGAGAGCCTTGCTAGCTCTCCATCAATTCCGAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGAACTGCAAAGAAGCGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATGCCGAGTTATCTGTGGACAAGGTTGTGGACAGTTGA 1428 0.4664 MGKKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPPPPPPVPLPEEIKLTDIENEISHDHDHVVEVVTAVEADVPVLPVQIETVRVEAARIPRFSGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRVGEEWDDSLQSKEQIEAKLLSKYEAATRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLENRSQMDKEMNDHASLKSSSRSITGGEISKSFARFQLNSEKQSPTASQNPGSPSFNSTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPSIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNAELSVDKVVDS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1814 475 MobiDBLite consensus disorder prediction 322 475 - -
Pvu1g1814 475 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 470 - -
Pvu1g1814 475 MobiDBLite consensus disorder prediction 391 426 - -
Pvu1g1814 475 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Pvu1g1814 475 PANTHER IQ-DOMAIN 5-RELATED 1 470 - -
Pvu1g1814 475 MobiDBLite consensus disorder prediction 1 60 - -
Pvu1g1814 475 Gene3D - 100 145 - -
Pvu1g1814 475 SMART iq_5 118 140 IPR000048 GO:0005515
Pvu1g1814 475 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Pvu1g1814 475 MobiDBLite consensus disorder prediction 322 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1814 Pvu-Chr1 43828223 43832622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1814 1 460 IQD Protein Family AT5G03040 55.158 1.79e-157 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1814 - - gmx:100800080 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1814 1 43828223 43832622 Pvu1g1814 1 43828223 43832622 ECH
Pvu1g1814 1 43828223 43832622 Pvu7g1689 7 39392488 39396171 PCT