Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g1807 | ATGCTGGATCTTAACCTCAACGCCGATTCCCCCTCCGACAACAACCACACGCCCCCGCTCTCCGTCGCTCAAATGGAGAGCTCCGGAAGCTTCAGTTCCTCCGTCGTCAATGCTGCCGACACCGATGACTCCTGCTCCTACGGCGACACCGTCGCCTACAACTTCGCCATCCTCAACAACAGCGCCTCCTTCTCCGCTGGAGAATCCTCCGTCCGCACCATCCAGCTCTTTCCGGCGACCGACTCCGGTGTCTCGCCGGCTTGGCTGGATGTCTCGTCGAAGGTGGATCAGCACGGTGTCGCGGCGGAGCAGATGATCACTCCGCGGCAGCCGCAGGTGAAGAAGAGCCGCCGAGGACCGAGGTCACGAAGCTCGCAGTATCGCGGCGTCACTTTCTATCGCAGAACAGGAAGATGGGAATCGCACATTTGGGATTGTGGCAAACAAGTGTACTTAGGTGGATTTGACACGGCGCATGCTGCGGCAAGGGCTTATGATCGAGCTGCGATCAAGTTCCGTGGGGTTGATGCGGATATCAATTTCAACGTTAGCGATTACGATGAGGATATAAAGCAGATGAGTAATTTCACGAAGGAGGAGTTTGTGCATATTCTGCGTCGACAGAGCACTGGTTTTTCAAGGGGAAGCTCCAAATACAGGGGAGTTACTCTGCATAAGTGCGGGCGATGGGAAGCTCGTATGGGGCAGTTTCTGGGTAAAAAGTATATATATCTTGGGCTATTCGACAGCGAATTAGAGGCTGCAAGAGCGTATGATAGGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAATTTCGAGCCCAGCATATACGAAGGGGAGGTGATTTCCCAATCTGATAATGAAGATGGCAAGCAAAATCTTGATCTTAACCTGGGCATAGCTCCCCCTTCTTACTCTGACAGTCAAATCAAGAACACACCCAGCAACGGGAGTGGTTTGAAAACTCCACCCTGCTGGGATGATAGCCCTGTCGAAAAGAGATTTATGTTTGAGCACTCTGGATCGAGATCACTGAATGTCCAGCCATCTCATGGCATCTCCAGAGTATCTGGACATCATCCTTCCACCTGGAATGGTAGCAATTTCTTTCCCATCTACGAGGAAACAGCAATAGAGAAGAAGTTGGAAGCTGGTCCCATGCCTAGTTGGGCATGGCAAGTCCAAGGTCCTTATGGCGGGGCAAGTCTTACTCCACCATTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAATAATACCATCAGCTGCGGATACTCAAATTCATTTTCCAAACATGACATTCCTCCACTCACATTTTCCACCATCAATCACTAACTCGAGCACTATATCCCCTTTCTTCATCGGTAGCTGA | 1380 | 0.5087 | MLDLNLNADSPSDNNHTPPLSVAQMESSGSFSSSVVNAADTDDSCSYGDTVAYNFAILNNSASFSAGESSVRTIQLFPATDSGVSPAWLDVSSKVDQHGVAAEQMITPRQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDRAAIKCNGREAVTNFEPSIYEGEVISQSDNEDGKQNLDLNLGIAPPSYSDSQIKNTPSNGSGLKTPPCWDDSPVEKRFMFEHSGSRSLNVQPSHGISRVSGHHPSTWNGSNFFPIYEETAIEKKLEAGPMPSWAWQVQGPYGGASLTPPFSTAASSGFPSTIIPSAADTQIHFPNMTFLHSHFPPSITNSSTISPFFIGS* | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g1807 | 459 | CDD | AP2 | 126 | 184 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | SMART | rav1_2 | 126 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | SMART | rav1_2 | 218 | 281 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | ProSiteProfiles | AP2/ERF domain profile. | 218 | 275 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | Gene3D | AP2/ERF domain | 125 | 184 | IPR036955 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | Gene3D | AP2/ERF domain | 217 | 276 | IPR036955 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | ProSiteProfiles | AP2/ERF domain profile. | 126 | 182 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | PRINTS | Ethylene responsive element binding protein signature | 219 | 230 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | PRINTS | Ethylene responsive element binding protein signature | 257 | 277 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 451 | - | - | |
Pvu1g1807 | 459 | PANTHER | AP2 DOMAIN TRANSCRIPTION FACTOR | 1 | 451 | - | - | |
Pvu1g1807 | 459 | MobiDBLite | consensus disorder prediction | 7 | 26 | - | - | |
Pvu1g1807 | 459 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Pvu1g1807 | 459 | CDD | AP2 | 217 | 277 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | SUPERFAMILY | DNA-binding domain | 217 | 277 | IPR016177 | GO:0003677 | |
Pvu1g1807 | 459 | Pfam | AP2 domain | 126 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | Pfam | AP2 domain | 217 | 267 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu1g1807 | 459 | SUPERFAMILY | DNA-binding domain | 125 | 184 | IPR016177 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g1807 | Pvu-Chr1 | 43723288 | 43726156 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g1807 | 101 | 311 | AP2-EREBP Transcription Factor Family | AT4G36920 | 77.103 | 1.22e-98 | 301 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Pvu1g1807 | AP2 | 1e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g1807 | K09284 | - | gmx:100808212 | 771.155 |