Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1798 ATGGCAACCGCCGGCGTGCAAGAAGCTCGTATTCCCCCACTAACTTCCACCTCCGAGATACCTCCTCTTTTCGACGGAACCACCAGGTTGTACATCAGTTATCTTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTACAAGGGACTACAAGACAAGATCGAACTGGTTCCTATTGATCTTCAAAACAGGCCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCGATTTGGTCAAATACATAGATGACAACTTTGAAGGTCAATCTCTGGTTCCCAGTGATCCTGCCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCACCAAAGAGCTGTATTCTGCACTGAAAGGAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAATTCTCTTGGTAAATTTGATGATGGGCCATTCTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTCGTATTTTTTGAGGTGTTCAAACATGATATAACTGAAGGAAGACCTAAACTTGCAGCATGGATTGAGGAAGTGAACAAGATTAATGCGTATACACAAACAAGAGGTGATCCGAAGGATATTGTTGATCTTTTCAAGAAACGTTTTTTGGCTCAACAGTAA 714 0.4258 MATAGVQEARIPPLTSTSEIPPLFDGTTRLYISYLCPYAQRVWITRNYKGLQDKIELVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYIDDNFEGQSLVPSDPAKKEFGEQLISYVDTFTKELYSALKGDPIQQASPAFDYLENSLGKFDDGPFFLGQFSWVDIAYVPFVERFQLVFFEVFKHDITEGRPKLAAWIEEVNKINAYTQTRGDPKDIVDLFKKRFLAQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1798 237 SUPERFAMILY GST C-terminal domain-like 101 233 IPR036282 -
Pvu1g1798 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Pvu1g1798 237 SFLD Main (cytGST) 29 210 - -
Pvu1g1798 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Pvu1g1798 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Pvu1g1798 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Pvu1g1798 237 SUPERFAMILY Thioredoxin-like 23 107 IPR036249 -
Pvu1g1798 237 CDD GST_C_Lambda 112 230 - -
Pvu1g1798 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Pvu1g1798 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Pvu1g1798 237 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 100 233 IPR010987 -
Pvu1g1798 237 Gene3D - 105 237 - -
Pvu1g1798 237 Gene3D Glutaredoxin 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1798 Pvu-Chr1 43660522 43663198 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1798 8 234 Glutathione S-transferase Gene Family AT5G02790 68.722 4.36e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1798 K00799 - gmx:100793025 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1798 1 43660522 43663198 Pvu7g1666 7 39031292 39034117 ECH
Pvu1g1798 1 43660522 43663198 Pvu1g1798 1 43660522 43663198 ECH
Pvu1g1798 1 43660522 43663198 Pvu7g1666 7 39031292 39034117 PCT