Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1796 ATGGCAACTTCTTTGTCAGATGTTCGGCCTCCTGCATTAACTTCCATCTCTGAACCACTCCCATTTTTTGATGGAACCACAAGGTTGTACATTTGCTATCTGTGCCCATATGCACAACGTGCATGGATAACTAGGAATTGCAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGACCTTAGAAATAGGCCTTCTTGGTATAAGGAGAAAGTGTACCCTCTTAATAAGGTGCCCTCGTTGGAGCACAATGGCAAGGTTTTAGGAGAAAGTCTTGATTTGATCAGATATATAGATGCCAACTTTGAGGGGGCATCTCTATTTCCAAGTGATCCTGCCAAGAGAGAATTTGGTGAGCAAATGATATCCCATGTTGACACGTTCACCAGTGGCATATACTCTTCATATAAAGGAGATCCTGTAGAACAAACCAGTGCTGCTTTTGATTACTTGGAGAATGCTTTGGGTAAATTTGATGATGGACCATTCTTCCTTGGCCAATTTAGTTTGGTGGATATTGCCTATGTTTCATTTCTTGAAAGGATCCAATTGGTGTTCTCTGAAATTTTTAAGCACGACATCACAGCAGGAAGGCCCAAACTAGCCACATGGATTCAGGAGGCTAATAAGATTGATGGCTACAAGCAGACAAAAGTTGACAAGGAGGAGTATTTAGAAGTTTTCAAGATAAAGTTTTTGGCTTAA 705 0.4099 MATSLSDVRPPALTSISEPLPFFDGTTRLYICYLCPYAQRAWITRNCKGLQDKIELVPIDLRNRPSWYKEKVYPLNKVPSLEHNGKVLGESLDLIRYIDANFEGASLFPSDPAKREFGEQMISHVDTFTSGIYSSYKGDPVEQTSAAFDYLENALGKFDDGPFFLGQFSLVDIAYVSFLERIQLVFSEIFKHDITAGRPKLATWIQEANKIDGYKQTKVDKEEYLEVFKIKFLA* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1796 234 SUPERFAMILY GST C-terminal domain-like 102 230 IPR036282 -
Pvu1g1796 234 Gene3D - 104 234 - -
Pvu1g1796 234 SFLD Main (cytGST) 28 209 - -
Pvu1g1796 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Pvu1g1796 234 SFLD Glutathione Transferase (cytosolic) 28 209 IPR040079 -
Pvu1g1796 234 PANTHER GLUTATHIONE S-TRANSFERASE TAU 4 233 - -
Pvu1g1796 234 CDD GST_C_Lambda 111 229 - -
Pvu1g1796 234 Pfam Glutathione S-transferase, N-terminal domain 29 104 IPR004045 -
Pvu1g1796 234 Pfam Glutathione S-transferase, C-terminal domain 142 206 - -
Pvu1g1796 234 Gene3D Glutaredoxin 1 103 - -
Pvu1g1796 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 233 IPR044629 GO:0004364
Pvu1g1796 234 SUPERFAMILY Thioredoxin-like 20 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1796 Pvu-Chr1 43651073 43653151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1796 9 233 Glutathione S-transferase Gene Family AT5G02790 65.778 2.10e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1796 K00799 - gmx:100816962 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1796 1 43651073 43653151 Pvu7g1665 7 39023406 39026001 PCT