Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1786 ATGGGGAAGGGAGGCCAAGATTATGGGAATCGAGAGAAGGGTTCAGAAGATTCGGACCGTGATATCTTCAAGGCTTGGGCCAAGGACGTGCGTGAGTGCGAGGAACACTTCAAGGTGAATGTCAAAGTGGGTTTGAATCAAGAAGAGGTCGAGAATCGGCAAAAGATTTATGGATTGAACGAGTTGGAGAAACACGACGGCCAATCGATATGGAGTCTGATTATCGACCAGTTCAACGACACTCTGGTTCGGATTCTACTTGCCGCCGCCATAATTTCCTTCGTGCTCGCTTGGTACGACGGCGACGAAGGCGGTGAGATGGAGATAACGGCGTTCGTTGAGCCTCTGGTGATATTCCTCATACTAATCGTGAACGCGATTGTTGGCGTGTGGCAGGAGAGCAATGCGGAGAAGGCGCTTGATGCGCTGAAAGAGATTCAGTCGGAGCACGCGGTGGTGATTCGGGACGGCGCGAAAATCCTCAGTTTGCCAGCGAAGGATCTCGTCCCTGGCGACGTCGTGGAGCTTAAGGTTGGTGATAAGGTCCCTGCTGATATGCGCGTTGTGGAATTGATCAGTTCCACTTTGCGGTTGGAGCAGGGCTCTTTGACTGGAGAAAGTGAAGCGGTGAATAAGAGTAACAAGCGTGTGGAGGAGGATGCCGATATCCAGGGGAAGAGAAGTATGGTTTTCGCGGGGACCACTGTTGTTAACGGGAATTGCATTTGCTTGGTCACTCAGACGGGCATGGATACGGAAATTGGGAAGGTGCATATGCAGATACATGTTGCGTCGCAGAGTGAGGAAGACACCCCATTGAAGAAGAAGCTCAACGAGTTTGGAGAGAAGCTAACCATGATAATTGGACTTATATGTATTTTGGTTTGGCTCATTAATGTTAAGTACTTCCTTTCATGGGAGTACGTGGATGGATGGCCCACGAATTTCAAGTTTTCGTTTGAAAAGTGTACCTATTACTTTGAAATTGCTGTGGCGCTGGCTGTGGCTGCTATTCCAGAAGGTTTGCCGGCTGTCATCACCACTTGCCTAGCTCTTGGTACTCGCAAGATGGCCCAGAAGAATGCCCTGGTTCGGAAGCTACCTAGCGTGGAGACTCTGGGTTGTACCACTGTGATTTGTTCCGATAAAACTGGTACACTGACTACCAACCAAATGGCTGTGTCGAAATTAGTCGCAATTGGCCATAATGTGGATACACTAAGAGCCTTCAAGGTGGAAGGAACTACGTACAATCCAGCTGATGGTCAAATAGAGAACTGGCCGACTGTAGGACTGGATGCTAATCTTAAGATGATTGCAAAAGTAGCAGCTATCTGTAATGATGCTGGAGTCGCACAATCAGAGCATAAGTTTGTCGCCCATGGAATGCCTACTGAAGCAGCTTTAAAGGTTTTGGTAGAGAAGATGGGCCATCCTGATGGATCCAAGGATGTTCGGTCTGCAAGCACAAGTACCTTGCTGCGTTGTTGTGAATGGTGGAGTGAGCATGACCGCCGGCTTGCTACTCTCGAGTTTGACCGTGACAGGAAGTCAATGGGTGTTATTGTGGACTCTGGTCTAGGAAAAAGGTCGCTTCTAGTTAAGGGTGCTGTGGAAAACGTGTTAGACAGAAGCACTAAAATTCAGTTGCGAGATGGTTCTGTAGTGGACCTAGATGATAATGCTAGGAACCTTGTATTGCAAGCACTTCATGAAATGTCAACTAGCGCATTGCGCTGTTTGGGATTTGCGTACAAGGATGAGCTCCCCAAATTTGAAAACTACAGTGGTAGTGACGATCATCCAGCACACCAGCTTTTACTTAATCCTTCCAATTATTCATCAATTGAAAGTGAACTTATTTTTGTTGGCTTGGTTGGATTGAGGGACCCCCCTAGGGAGGAAGTATACCAAGCAATTGAAGACTGCAGAGAGGCTGGAATCCGTGTTATGGTTATAACTGGGGACAACAAGAACACTGCTGAAGCTATATGCCGTGAAATAGGTGTATTTTCCCCTGATGAAGACATTACCTCTAAAAGTTTAACAGGTAAAGATTTTATGGAATTGCGTGATAAAAAGGCCTATTTGGGTCAGAGTGGCGGCCTTTTGTTTTCAAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTCAAAGAGCAAGGAGAGGTGGTGGCCATGACCGGTGATGGTGTTAATGATGCACCTGCCTTGAAGCTTGCAGACATTGGTGTTGCAATGGGTATTGCAGGGACTGAGGTGGCAAAGGAAGCTTCAGATATGGTGTTGGCAGATGATAATTTTAGTTCAATTGTTGCTGCTGTTGGTGAGGGTAGATCTATCTACAATAACATGAAGGCTTTCATAAGGTATATGATCTCTTCAAATATTGGCGAGGTTGCTTCAATATTTTTAACAGCTGCACTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACTGACGGACCCCCTGCAACTGCTCTAGGATTTAATCCTCCAGATAAGGATATAATGAAGAAGCCTCCTCGTCGCAGTGATGACTCATTAATTAATTTTTGGATTTTATTCCGCTATATGGTTATTGGGATTTATGTTGGATTAGCTACAGTTGGTGTCTTCATCATATGGTATACACACGGTTCTTTCTTGGGTATTGACCTTAGTGGGGATGGACATTCTCTTGTCACTTATACTCAACTTGCCAACTGGGATCAATGCTCCTCATGGAAGAACTTCACTGCTTCTCCATTCACTGCTGGTGCTAAAACTATCACGTTCGACAACCCCTGCGATTACTTTCATACTGGTAAAGTGAAGGCTATGACATTGTCCCTTTCTGTGTTGGTAGCCATTGAAATGTTCAACTCTCTCAATGCCCTATCTGAAGATGGAAGCCTTTTGTCAATGCCCCCTTGGGTCAACCCTTGGCTTCTTTTGGCAATGTCAGTATCATTTGGTCTTCACTTTTTGATCTTGTACGTGCCATTCTTGGCACAAGTATTTGGTATCGTGCCCCTGAGCTTAAACGAGTGGCTTTTGGTTTTGGCTGTTGCCCTTCCGGTCATTCTGATTGACGAGATTCTGAAATTTGTGGGGAGATGTACAAGTGGGCCTCGACCAGCTGCAAGAAAATCAAAGCAAAAATCAGAGTAG 3180 0.461 MGKGGQDYGNREKGSEDSDRDIFKAWAKDVRECEEHFKVNVKVGLNQEEVENRQKIYGLNELEKHDGQSIWSLIIDQFNDTLVRILLAAAIISFVLAWYDGDEGGEMEITAFVEPLVIFLILIVNAIVGVWQESNAEKALDALKEIQSEHAVVIRDGAKILSLPAKDLVPGDVVELKVGDKVPADMRVVELISSTLRLEQGSLTGESEAVNKSNKRVEEDADIQGKRSMVFAGTTVVNGNCICLVTQTGMDTEIGKVHMQIHVASQSEEDTPLKKKLNEFGEKLTMIIGLICILVWLINVKYFLSWEYVDGWPTNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVSKLVAIGHNVDTLRAFKVEGTTYNPADGQIENWPTVGLDANLKMIAKVAAICNDAGVAQSEHKFVAHGMPTEAALKVLVEKMGHPDGSKDVRSASTSTLLRCCEWWSEHDRRLATLEFDRDRKSMGVIVDSGLGKRSLLVKGAVENVLDRSTKIQLRDGSVVDLDDNARNLVLQALHEMSTSALRCLGFAYKDELPKFENYSGSDDHPAHQLLLNPSNYSSIESELIFVGLVGLRDPPREEVYQAIEDCREAGIRVMVITGDNKNTAEAICREIGVFSPDEDITSKSLTGKDFMELRDKKAYLGQSGGLLFSRAEPRHKQEIVRLLKEQGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLINFWILFRYMVIGIYVGLATVGVFIIWYTHGSFLGIDLSGDGHSLVTYTQLANWDQCSSWKNFTASPFTAGAKTITFDNPCDYFHTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVILIDEILKFVGRCTSGPRPAARKSKQKSE* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1786 1059 Pfam Cation transporting ATPase, C-terminus 815 1040 IPR006068 -
Pvu1g1786 1059 SFLD C1.7: P-type atpase like 361 782 - -
Pvu1g1786 1059 Pfam Cation transporter/ATPase, N-terminus 26 93 IPR004014 -
Pvu1g1786 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 387 628 IPR023299 GO:0000166
Pvu1g1786 1059 SUPERFAMILY HAD-like 378 834 IPR036412 -
Pvu1g1786 1059 Pfam E1-E2 ATPase 146 360 - -
Pvu1g1786 1059 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 8 1055 - -
Pvu1g1786 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 117 230 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu1g1786 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 319 401 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu1g1786 1059 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 704 811 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu1g1786 1059 Gene3D - 390 631 IPR023299 GO:0000166
Pvu1g1786 1059 Pfam haloacid dehalogenase-like hydrolase 377 744 - -
Pvu1g1786 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 24 1043 IPR023298 -
Pvu1g1786 1059 Gene3D - 76 1042 - -
Pvu1g1786 1059 SUPERFAMILY Calcium ATPase, transduction domain A 149 257 IPR008250 -
Pvu1g1786 1059 SMART Cation_ATPase_N_a_2 24 98 IPR004014 -
Pvu1g1786 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 199 213 - -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 730 749 - -
Pvu1g1786 1059 PRINTS P-type cation-transporting ATPase superfamily signature 754 766 - -
Pvu1g1786 1059 Gene3D - 44 264 - -
Pvu1g1786 1059 Gene3D - 377 775 IPR023214 -
Pvu1g1786 1059 PANTHER CALCIUM-TRANSPORTING ATPASE 8 1055 - -
Pvu1g1786 1059 SFLD p-type atpase 361 782 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1786 Pvu-Chr1 43573055 43579472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1786 1 1059 Primary Pumps ATPases(2) AT1G07670 79.962 0.0 1736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1786 K01537 - gmx:100788807 1984.15