Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1785 ATGGGAAAGGAGAAGGAGCAGGAGGAGTTGGTGCCTTCTACCGTCACCGCCGACGAAGTTAACCATGACGACTTGATTCTCAGCCAGGATCTATTTTGCACACCAGATTACTTGACTCCGGAAAACCAGTTTCCTTTGAAAGGCTTCCATTTTAGCGTCGACATGGAGGAGGAGGAAGATTACCCTTACCCCAAGTCACTAGAGAAGCCCAACACTTCAAAAACCAAGAGACGTCGAATGGATGATGGTATCTCAGGAGACACTCTCAGTTCTATGTCTTCTGGTGATGGTCAGGCAATTGTGGAACTTGGGATGGACTTTGTTGGAGAGGAAGTCGAATATAAGCTTAGGGCTCGAAGTTATGTGTCACGTTCTGCAATTGCATTGCGTTGCAGGGTTATGCCTCCTGCTTGCACTAGAAACAACTTTATGACAAGTCTTTCGGAAGAGGAACTGTACCCTTTTAGACTCCAAAATTCTAAATGTGCTGACCTCTTCCCTTCACTTACTCGTGGTAATGGTCAATCACGCTACCACAACGACTTTTATCAGTATGAGCAAATTGGTAGAGGAAACTTTAGCAATGTTTATAAGGTATTGAAGCAACTAGATGGTTGCTTGTATGTTGTGAAATGTACCACCAAGAAGTTGGGCAGTGGAAGAGAAAGGATTAAAGCTTATACAGAAGTTCAATCTATGGTTGCCATAGGTTTCCATGAGAACATTGTGGGATATTATTCTTTGTGGTCTGATAATGGACAACTGTATATTCAGTTGGAGCTATGTGATCACAGTTTATCCACTAAAAATTGCCCAGCATTGCTTACTGAACGACATGAAATAGAAGCTTTATATCAGGTTGCTTGTGCATTGCAATTTATACATGAGAAGGGAATAGCTCATCTTGATGTTAAGCCGGAAAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAATAACATGTTTATTGCAGAGGGTGAGCCAACTCGAGGTCGGTCGGCATCTGGATGA 1041 0.4207 MGKEKEQEELVPSTVTADEVNHDDLILSQDLFCTPDYLTPENQFPLKGFHFSVDMEEEEDYPYPKSLEKPNTSKTKRRRMDDGISGDTLSSMSSGDGQAIVELGMDFVGEEVEYKLRARSYVSRSAIALRCRVMPPACTRNNFMTSLSEEELYPFRLQNSKCADLFPSLTRGNGQSRYHNDFYQYEQIGRGNFSNVYKVLKQLDGCLYVVKCTTKKLGSGRERIKAYTEVQSMVAIGFHENIVGYYSLWSDNGQLYIQLELCDHSLSTKNCPALLTERHEIEALYQVACALQFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNNMFIAEGEPTRGRSASG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1785 346 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 17 337 - -
Pvu1g1785 346 SMART serkin_6 182 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1785 346 SUPERFAMILY Protein kinase-like (PK-like) 176 332 IPR011009 -
Pvu1g1785 346 MobiDBLite consensus disorder prediction 60 93 - -
Pvu1g1785 346 Pfam Protein kinase domain 184 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1785 346 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pvu1g1785 346 Gene3D Transferase(Phosphotransferase) domain 1 256 342 - -
Pvu1g1785 346 Gene3D Phosphorylase Kinase; domain 1 155 255 - -
Pvu1g1785 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Pvu1g1785 346 ProSiteProfiles Protein kinase domain profile. 182 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1785 346 MobiDBLite consensus disorder prediction 60 84 - -
Pvu1g1785 346 PANTHER BNAA08G27310D PROTEIN 17 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1785 Pvu-Chr1 43560036 43561076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1785 24 337 Core Cell Cycle Gene Families AT1G02970 52.025 1.39e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Pvu1g1785 Pkinase 5.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1785 K06632 - gmx:100784055 441.039