Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1778 ATGAGAAAGTTGTGTTTTAACCCCAAGACGCCGTCGTTTGCCTTGGCCCGCAATTCTCCTTCTTCGCCACAATCTTTAGTCTCATGCCCAACACCGCCCAGGCTCAGCTTTTCTGAACCTACCAGCTTCGACGAAGATAGCTTCATGGAGGAAGCAGAGGCACTCATACTGAAATGGAACCCTGACTCCTCAGCCTACGCCAAAGTCACTTCCCTATTTTACCAAGACAAAACCGAAGCCAAACACTACATTAACTGCGTTAACCAGCTTCATCAAACCATGCATTCCTTGCTCTCTCACAGCCCTTCCTCCCATAAACTTATCCTCGCTCACAACCTAATGCAGATCGCCATGAAGAGACTCAGGAAGGAGTTCTACCAGATCTTATCCATGAACCGCGCTCACCTTGACCCCGAATCAGTCTCCGCCAGATCCTCTCGCACCTCCGCCAATTCCAGCTCATCCGATTACGACGACGACTTCGCGGCGGAAGACGACGATATCCGCGCTGCTGGCGACTCTATCTCCGAAGTTGAGCAGGTTTCCTCAGGCGCCATGGCGGATCTGAAACTAATCGCCGACTGCATGGTCTCTTCCGGCTACGCGAAAGAGTGCGTCAGCGTTTACATCATTATCCGAAAATCCATAATCGATGAAGGAATCTATCGCCTCGGCGTTGAGAAAATGACCTCCTCGCGCGCTAACAAGATGGATTGGGAAGTGCTTGATTTGAAAATCAAGAATTGGTTAGAGGCAGTAAGGATTTCCGTTAGAACGCTCTTTAACGGAGAGAGAATCCTCTGCGACCATGTCTTCAGTTACTCAGATTCCGTAAGAGAATCCTGCTTCGCCGAGATTTCCAGAGACGGCGCCTCTCTCCTTTTCGGATTCCCCGAACTCGTCGCCAAAACAAAGAAATCGTCGCCAGAGAAGCTGTTCCGCGTGCTCGACATGCACGCTGTGGCTTCAGAACTGTGGCCGGAGATCGAGTCCATCTTCTCCTCCGATTACAACTCCGCCGCGCGTACTCAGTTCCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTCGCTCGCAGAGTTCGAGTCCACGATCCAAAAAGATTACTCCAAGTCTGCGGTTAACAGAGGTGGCGTCCACTCGCTCACGATCCAGACGATGAATTATCTGACACTCCTCGCAGATTACGTCAACGTACTCTCTGACATATTCCCGCGCGACTGGCTTCCGCTACCGAAGTCTTCATCGCTGCCGGAGTCTTATTTATACAGTCCGGAGTCTGATTACTCTGCGTCGACGCCGGCGCTGACGGTCCGCTTTGCGTGGCTGATTCTTGTACTCCTTTGCAAGCTCGACGGCAAAGCGCAGCATTGCAAGGACGTTTCACTATCTTACTTGTTTCTGGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAGCCTGCAGTACGTGCTTGGCGACGATTGGATTACGAAGCACGAAGCTAAAGCGAAGAGGTTCGTCGCGAACTACGAGAAGGTGGCTTGGGGAGAAGTGGTTTCATCGCTGCCGGTAAATCCGGCCGTAGCGGAGGCGAGGACGGTGTTTGAGAACTTCAACCTCAAATTTGAGGAAGCATATCGGAAGCAGAACTCGTTTGTGGTAGCTGATAGAGAACTGCGAGATGAAATAAAAGGTTCGATCGCGAGAAGTGTTGTGCCGAAATATCGCGAGTGGTATAATGCGCTGCTTGCTACGGTGGGATCAGTGAGGGACTTGATGGTAAGGGAGTATGTCACGTTTACCCCTGAAGACATTGAAAATTACCTCGCTAACCTCTTCTTTTTTGGAACGTCATCCAGTTCTGTATCGTCCTCGTCGGTAACTTCCTCCCCTCTCCGGAGTTGGAGTTAA 1908 0.5121 MRKLCFNPKTPSFALARNSPSSPQSLVSCPTPPRLSFSEPTSFDEDSFMEEAEALILKWNPDSSAYAKVTSLFYQDKTEAKHYINCVNQLHQTMHSLLSHSPSSHKLILAHNLMQIAMKRLRKEFYQILSMNRAHLDPESVSARSSRTSANSSSSDYDDDFAAEDDDIRAAGDSISEVEQVSSGAMADLKLIADCMVSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKMTSSRANKMDWEVLDLKIKNWLEAVRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSPEKLFRVLDMHAVASELWPEIESIFSSDYNSAARTQFLTSLQRLTESAQFSLAEFESTIQKDYSKSAVNRGGVHSLTIQTMNYLTLLADYVNVLSDIFPRDWLPLPKSSSLPESYLYSPESDYSASTPALTVRFAWLILVLLCKLDGKAQHCKDVSLSYLFLANNLWYVVARVRSSSLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPVNPAVAEARTVFENFNLKFEEAYRKQNSFVVADRELRDEIKGSIARSVVPKYREWYNALLATVGSVRDLMVREYVTFTPEDIENYLANLFFFGTSSSSVSSSSVTSSPLRSWS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1778 635 MobiDBLite consensus disorder prediction 140 157 - -
Pvu1g1778 635 Pfam Exo70 exocyst complex subunit 247 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu1g1778 635 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Pvu1g1778 635 MobiDBLite consensus disorder prediction 140 161 - -
Pvu1g1778 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 621 IPR004140 GO:0000145|GO:0006887
Pvu1g1778 635 SUPERFAMILY Cullin repeat-like 50 612 IPR016159 -
Pvu1g1778 635 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 621 - -
Pvu1g1778 635 Gene3D Exocyst complex component Exo70 65 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1778 Pvu-Chr1 43500677 43502843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1778 49 612 EXO70 exocyst subunit family AT3G09520 54.609 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1778 K07195 - gmx:100810548 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1778 1 43500677 43502843 Pvu7g2412 7 47482046 47492502 PCT
Pvu7g1644 7 38703385 38705670 Pvu1g1778 1 43500677 43502843 PCT