Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1776 ATGCAGAGGTCTAAAGGAAGCAGGCAGGTTCATAGACATAAAAAACTTCAGAGTTTTCCTTCTGATTCTGGTTCTTGCAGTGATGGTGTTGCAGATGAAGATTCAGGTTCATTTCAATTGGGCTGTGTGTCTTCAAAAAAACCGTTTGGGACTCCCATGAAGAAGTTATTAGCTGATGAACTGTCCCGAGAAACCGAACCCAAAAGAAGAGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGAAGGACTTCCAATGCAATTGCCTGCTAATAAGCATCACAAGCATGTGTCAGAAAATAACATGAAAAGGACAACACCGGCAGTGAAAACTAGAAGCACTGGTAAACTATACGGCGGTCGAACATCTAGAAGAAGTTCAAAGAATCAACAAGAGTTTAAGGATGTGTTTGAGGTCTCCGAGATCTCAAATATAGAGAGCTGTAGGTATTCATCCCAGGGGTCTGTAAAGTTGAAGATCACTGATGATGAAATGTCATTTGTTGAACAGAAATTCATGAATGCCAAACTCCGTGCAACTTGTCAGGATTTACAGTCTTCCCAGGATTCCCACGATACACTCGAGATTCTAGACTCTAACAATGATCTTTTGCAAAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAGGCATCTAGATGATCTGCAAGGTTCCGCTTCCGAATCACATTTTGGTCACAGCGAAGGTACCAAATCATCGGCTATGGAGAACTATGAACAAGGTGACTTAAGCAAGAAGCCGGATAGGGAGATGAAAAGGTTGAATTACAATAGATCTCATCAGAAGCATCATGGTGGTTATTCTTGTAATGTAGTCAGAAGACAGGATATTCATAGTTCGCCAAAATCATCAAAGCTTCAGTTTAAAGGGGGAAATGAGCCTGATGCAGTCCCAACAAGGATTGTTATCCTAAAACCTAATCTTGGAAAAGTGCAGAAAGCTACCAAAATTGGTTCACCACCTTGTTCTTCACATACTTTTCTGTTAGAGCGTGGAAAGTGTCCTGAATTTTCAGATAGGAGATTTAGGGACACTGAACTGAATCAAAGGAAAAATTTGCATGATAATGCCTGGCATTCAAGGCAAAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAATTTGAATAACGACTCCATGTTATTATCATCTTCTAGATTTAGAGGAAATACTGGGGACAATAGCTCATGTAGTTTCTCTGGGAATGAATCTCTTGGGGAATCAGAGGTGACATCTGCAACTTTGGGAAGATCATTTTACATAAGTAATACTATCAGCCCATCATCCTGTTTTAGTGAATCATTTGTCAGTAAAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCACTCAAGTCTCAGCAGGGCCATTCTGTATCCATGAGTGGCACCCTGGCTGAAATGCTTGCGATCCCTGACAAGGAAATGAAAACAGCTAATTTTGACAGCATCCCTAGTGGGAAAGGTTTACGTGATAAACTTTCTAGCAAAGGTAAACCTGCTGGGTGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTATTGGAAGTTTACCGAGGTCTAAGTCTCTTCCTGCTTCATCTACTACTTCCTTCGGAAGTCCTAGAACAATTTTGCGCCATGAAGCTCTTCACGATGACCGATTTATGATGCCAAAGGTAGCCTGTAAACGGGAAAGGAAGAAAGTGGTGAAATGTCTTGATCAGAGACAGTGTATGAATACTAGAAATCTAAAAAACAAGAATTCTCGGTGTTCTCATCCATCAAACCTAGAAGGTAATGAGTCATCCCCAGACTTGAATACAATTCAAAATAAAGTGAGGATTAATCTTGAAGAGGATTTGCCGAAGCAAGAAATGTTGGCCGCTGAATCATTAGCTGAGATCATCAGAGAAACTATTGCAGTTACTGAAGCTGTTGTAGACGTGGGAGATGAAAATGCAGTTGGTTCATCTGAATCTTATATTAAGGAGTTGTCAGTTGGTTCTTCCAGAAAAATTTCTGCCCCCTTGCAAACACCGGTATCTGGACTTGAATCTTCATGCTGTAAAGATACGGATCAACCCAGTCCAGTCTCAGTGCTAGAACCTTCTTTTACTGATGATCTGTCATCATGTTCCGATTGTTTTGAAAGTCTCAGTGTTGATATACAAGGGCTTCGAATGCAACTTCAGTTACTGAAGCTAGAATCTGAAGAATTTGTGGAAGAATCCGTTCTAATTCAAAGTGATGAAGATGGTGGGGAAGCATATTCAGCAATTTCAGAAGACAATGAATTACTTAAGACTGGAGATAGCTGGGAGTCTTCCTACATGATTGATGTCTTGTCTGAATCTGGTATTGATAGAGCTGAACCTGATGCATTTTTGGAAGTTTGGCATTCTCCTGGATGCCCTGTTAGTCTTTCAGTGTTTGATGAGCTTGAAAAGAAGTACTCTGATTGGAATACTTGCCCAAGGTCAGAAAGGAGATTGCTTTTTGATCGTATAAATTGGGGAATTATCGAAATATACGAGCAATTCGTTAGAATACAATCATGGGTAATCCCTTCAAGATCCACAAATCTTCGTTCTAGTTCTAAATTGCTCAAAAATGGAGTCCGAGATTGTCTGTACAAGATGCTGTGGAGCCAGGGAAAAGTAAAGGATACTGCACTGGGGAAGGTGTTGGTTAGCGAATTACAGTGGTTGAACTTAATAGATGAAATTGCTGGAATAGGTAGCGAAGTTGAGAGCTTGCTACTTGATGATCTAGTGGCAGAGATAGCTGTTACATAG 2838 0.4042 MQRSKGSRQVHRHKKLQSFPSDSGSCSDGVADEDSGSFQLGCVSSKKPFGTPMKKLLADELSRETEPKRRAPGVIGRLMGLEGLPMQLPANKHHKHVSENNMKRTTPAVKTRSTGKLYGGRTSRRSSKNQQEFKDVFEVSEISNIESCRYSSQGSVKLKITDDEMSFVEQKFMNAKLRATCQDLQSSQDSHDTLEILDSNNDLLQKYFKRPDSLFKRHLDDLQGSASESHFGHSEGTKSSAMENYEQGDLSKKPDREMKRLNYNRSHQKHHGGYSCNVVRRQDIHSSPKSSKLQFKGGNEPDAVPTRIVILKPNLGKVQKATKIGSPPCSSHTFLLERGKCPEFSDRRFRDTELNQRKNLHDNAWHSRQNSLESREIAKEITSQMKNNLNNDSMLLSSSRFRGNTGDNSSCSFSGNESLGESEVTSATLGRSFYISNTISPSSCFSESFVSKEAKKRLSERWKMSLKSQQGHSVSMSGTLAEMLAIPDKEMKTANFDSIPSGKGLRDKLSSKGKPAGWVEPLGISSRDGWKDGCIGSLPRSKSLPASSTTSFGSPRTILRHEALHDDRFMMPKVACKRERKKVVKCLDQRQCMNTRNLKNKNSRCSHPSNLEGNESSPDLNTIQNKVRINLEEDLPKQEMLAAESLAEIIRETIAVTEAVVDVGDENAVGSSESYIKELSVGSSRKISAPLQTPVSGLESSCCKDTDQPSPVSVLEPSFTDDLSSCSDCFESLSVDIQGLRMQLQLLKLESEEFVEESVLIQSDEDGGEAYSAISEDNELLKTGDSWESSYMIDVLSESGIDRAEPDAFLEVWHSPGCPVSLSVFDELEKKYSDWNTCPRSERRLLFDRINWGIIEIYEQFVRIQSWVIPSRSTNLRSSSKLLKNGVRDCLYKMLWSQGKVKDTALGKVLVSELQWLNLIDEIAGIGSEVESLLLDDLVAEIAVT* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1776 945 MobiDBLite consensus disorder prediction 599 620 - -
Pvu1g1776 945 Pfam Protein of unknown function (DUF3741) 169 213 IPR022212 -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 1 52 - -
Pvu1g1776 945 Coils Coil 737 757 - -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 19 44 - -
Pvu1g1776 945 PANTHER AFADIN 4 943 - -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 225 255 - -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 227 246 - -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 108 130 - -
Pvu1g1776 945 Pfam Domain of unknown function (DUF4378) 789 941 IPR025486 -
Pvu1g1776 945 PANTHER AFADIN 4 943 - -
Pvu1g1776 945 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
Pvu1g1776 945 MobiDBLite consensus disorder prediction 108 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1776 Pvu-Chr1 43463081 43469377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1776 48 944 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 33.801 3.89e-123 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1776 - - pvu:PHAVU_001G171300g 1864.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1776 1 43463081 43469377 Pvu7g1639 7 38616516 38621915 PCT