LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g1767	ATGGCTTGTTTTCCACAAAAACTCTTTAACAGACTGAAGCCATTCATAGGTGTAGTTTTCTTACAGTTTGGATATGCTGGTATGGATGTTCTATCCAAAGCTGCCCTCAACAAGGGAATGAGTAACTATGTGTTTGTCGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCGGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACGTTTTCAATCTTCATGAAGCTAGTGATTCTCAGCTTGCTAGAGCCAGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTGCTCCCTGCCATTACCTTTCTCATGGCTTGGATTCTTAGGCTTGAGAAGATAAAATTAAAAAGTATACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCTACTGTTGCAGGTGCCATGATCATGACACTGCTAAAGGGCCCAATACTTGATCTTTTTGGAACACACGGCAACAATACAAACAACCTGCAAAATGGTGGGGTAAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTAACAGCATGGATATGCTTATTGGGAACGGTTGAAGGTGGCATAGTGGCACTTGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGCAATGGGATACAAAATTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGCGTGGTGATGAAAGATAGAGGCCCGGTGTTTGTAACAACTTTCAACCCTCTTTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTACCTTGGAAGGGCGGTTGGAGCTATTGTAATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGACTACGGGTCATCAAGTGCGATTACTGAAGAGGATATATTTTCAGCCAAGCAAACAGTAGAAAAGAGCAACGGCAAAGAAGAACATTCTAATTTCGAGGTCATCACTCTCAGTAACTTAGGCACAGGAAACATAGCAAGAGATGAACAAGTATGA	1149	0.423	MACFPQKLFNRLKPFIGVVFLQFGYAGMDVLSKAALNKGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKLVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFLMAWILRLEKIKLKSIRSQAKVVGTLATVAGAMIMTLLKGPILDLFGTHGNNTNNLQNGGVNLQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGVVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAVGAIVIILGLYLVVWGKSKDYGSSSAITEEDIFSAKQTVEKSNGKEEHSNFEVITLSNLGTGNIARDEQV*	383

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu1g1767	382	Pfam	EamA-like transporter family	19	154	IPR000620	GO:0016020\|GO:0016021
Pvu1g1767	382	Pfam	EamA-like transporter family	187	326	IPR000620	GO:0016020\|GO:0016021
Pvu1g1767	382	PANTHER	WAT1-RELATED PROTEIN	9	353	IPR030184	GO:0016021\|GO:0022857
Pvu1g1767	382	PANTHER	WAT1-RELATED PROTEIN	9	353	-	-
Pvu1g1767	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	48	156	-	-
Pvu1g1767	382	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	247	330	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g1767	Pvu-Chr1	43342337	43345293	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu1g1767	6	372	Nodulin-like Gene Family	AT2G37460	64.850	3.55e-175	491

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g1767	-		-	gmx:100777050	657.907

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1767	1	43342337	43345293	Pvu1g1767	1	43342337	43345293	ECH
	Pvu1g1767	1	43342337	43345293	Pvu7g1630	7	38500837	38504526	PCT

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