Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g1763 | ATGGCTTTGATGTCTGGACTTCAGCGTCTACTTCGCCACACCCCACTTCTTCATTCGCACCATGCTTCCATTCGTTTCGCCTCAACTCTCACTTCCCCCAAACTTTTCGTCAGCGGTCTCTCTAGATTGACAACAGATGAAAAACTTAAGGAAGCATTTACTTCGTTTGGACAGCTGGTGGAAGCTAAGGTGATAACTGATAGAGCCTCTGGAAGATCGAAGGGATTTGCCTTTGTAACTTATACAAGCATAGAAGAAGCTGAAAAGGCTAGAGAAGGAATGAATGCTAAATTTTTGGATGGATGGGTTATATTTGTTGATCCTGCTAAACCAAGAGAGCCCAGACCTCCTCAGCAATCACAGTCTCGCCCCTCTGAATCAGGTTTCACTGTTAACAAAACAGTTGGGTGGTGTGGTTGA | 420 | 0.4476 | MALMSGLQRLLRHTPLLHSHHASIRFASTLTSPKLFVSGLSRLTTDEKLKEAFTSFGQLVEAKVITDRASGRSKGFAFVTYTSIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSRPSESGFTVNKTVGWCG* | 140 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g1763 | 139 | PANTHER | NUCLEOLAR PROTEIN 8 | 1 | 139 | - | - | |
Pvu1g1763 | 139 | SUPERFAMILY | RNA-binding domain, RBD | 31 | 132 | IPR035979 | GO:0003676 | |
Pvu1g1763 | 139 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 33 | 111 | IPR000504 | GO:0003723 | |
Pvu1g1763 | 139 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 35 | 101 | IPR000504 | GO:0003723 | |
Pvu1g1763 | 139 | Gene3D | - | 22 | 133 | IPR012677 | - | |
Pvu1g1763 | 139 | PANTHER | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | 1 | 139 | - | - | |
Pvu1g1763 | 139 | SMART | rrm1_1 | 34 | 107 | IPR000504 | GO:0003723 | |
Pvu1g1763 | 139 | MobiDBLite | consensus disorder prediction | 110 | 139 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g1763 | Pvu-Chr1 | 43292086 | 43294584 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g1763 | 35 | 115 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 39.506 | 1.29e-13 | 64.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g1763 | - | - | gmx:100306326 | 236.884 |