Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1763 ATGGCTTTGATGTCTGGACTTCAGCGTCTACTTCGCCACACCCCACTTCTTCATTCGCACCATGCTTCCATTCGTTTCGCCTCAACTCTCACTTCCCCCAAACTTTTCGTCAGCGGTCTCTCTAGATTGACAACAGATGAAAAACTTAAGGAAGCATTTACTTCGTTTGGACAGCTGGTGGAAGCTAAGGTGATAACTGATAGAGCCTCTGGAAGATCGAAGGGATTTGCCTTTGTAACTTATACAAGCATAGAAGAAGCTGAAAAGGCTAGAGAAGGAATGAATGCTAAATTTTTGGATGGATGGGTTATATTTGTTGATCCTGCTAAACCAAGAGAGCCCAGACCTCCTCAGCAATCACAGTCTCGCCCCTCTGAATCAGGTTTCACTGTTAACAAAACAGTTGGGTGGTGTGGTTGA 420 0.4476 MALMSGLQRLLRHTPLLHSHHASIRFASTLTSPKLFVSGLSRLTTDEKLKEAFTSFGQLVEAKVITDRASGRSKGFAFVTYTSIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSRPSESGFTVNKTVGWCG* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1763 139 PANTHER NUCLEOLAR PROTEIN 8 1 139 - -
Pvu1g1763 139 SUPERFAMILY RNA-binding domain, RBD 31 132 IPR035979 GO:0003676
Pvu1g1763 139 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Pvu1g1763 139 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 101 IPR000504 GO:0003723
Pvu1g1763 139 Gene3D - 22 133 IPR012677 -
Pvu1g1763 139 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 139 - -
Pvu1g1763 139 SMART rrm1_1 34 107 IPR000504 GO:0003723
Pvu1g1763 139 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1763 Pvu-Chr1 43292086 43294584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1763 35 115 Eukaryotic Initiation Factors Gene Family AT3G16380 39.506 1.29e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1763 - - gmx:100306326 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1763 1 43292086 43294584 Pvu1g1763 1 43292086 43294584 ECH