Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1762 ATGACATCGTTCTTAAAGCCTGAGAATGCTCTCAAAAGGGCGGAAGAGTTAATCAATGTTGGGCAGAAGCAGGATGCTTTACAGACTCTTCATGACCTCATTACCTCAAAGAGATACAGAGCATGGCAGAAGACACTTGAACGGATTATGTTTAAGTATGTTGAACTTTGTGTGGACATGCGCAAAGGTCGGTTTGCAAAAGATGGACTTATTCAGTATAGGATAATATGTCAGCAAGTCAATGTTAGTTCACTGGAGGAGGTGATCAAACACTTTATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGGAGTCAAGCACAGGCATTAGAAGAGGCCCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGTTGAGTTATGTCAGTGGTGAGAAAGGAAAGGACAGATCTGATCGAGAGCTTGTTACCCCATGGTTTAAATTTCTTTGGGAAACTTACCGGACAGTGCTCGAGATCTTGCGAAACAACTCAAAACTGGAAGCTTTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAACGAACAACAGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCATTTGGCTAATCTCAATAAATACCGTGACCAAAGAGATAGGCCTGACCTTTCAGCTCCTGAAAGCTTACAACTGTATCTTGATACTAGAGTTGAGCAGCTGAAAATTGCCACTGAACTTGAACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTGGTCAAGAAAACTCCCAAGCCATCTTTGATGGTTGTTTACTATGTGAAGCTGACTGAAATATTTTGGATATCGTCAAGTCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTATTGCAGAAAAGCTTCAATAAGAATCTGAGCCAGAAGGATTTGCAATTAATAGCTTCGTCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCTCATGACCGCACACATGGTGCGTCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGGATGGCCAATCTCATTGGCTTTAATCTTGAGACTAAACCTGAAAGCAGAGAAATGCTGTCAAGATCATCACTTCTTGCTGAACTGGCATCCAAGGGAGTGATGTCTTGTGTAACTCAGGAAGTGAAAGATGTTTACCATCTTTTGGAACATGAATTTCATCCCTCAGATCTTGCATTGAAAGCGCTGCCCTTGATAACTAAAATCTCAAAGTTAGGGGGCAAGCTTTCTACAGCTTCTTCTGTTCCAGAAGTACAATTGTCTCAATATGTACCAGCACTGGAAAGACTAGCTACCATGAGGTTGCTGCAGCAGGTGTCCAATGTGTACCAGACAATGAAGATTGAGACTTTAACTGGGATGATCCCATTCTTTGACTTTTCTGTAGTTGAAAAGATTGCTGTAGATGCTGTAAAGCAGAAGTTTGTATCCATGAAGGTTGATCACATGAAAAATGTTGTGATTTTTTGCAAAACGAGTCTCGAGTCTGATGGTTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAGGCCAGGCAAATGATTTATCCTCCTGATAGGAAACCATCTAAACTTGGAGCTTTACTTCCAACTTTGACAGAGGTTGTTGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGCGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCAAAAAGACTAAGACTTCAGAAAATAACAGAAGAAGCAGAACAAAGACGGCTTGCGACAGAGTATGAGCAGAGGAAGAATCAGAGGATCCTCAGAGAGATAGAAGAAAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAAGAAGCTGAAAAACGTATTAAAAAGAAGGGCAAAAAGCCTATCATTGAGGGAGACAAAATCACTAAGCAGACCTTGATGGAGTTAACTTTGACTGAACAACTCCGGGAAAGGCAGGAAATGGAAAAGAAGTTGCAGAAGTTAGCAAAAACAATGGATTATTTGGAAAGAGCGAAAAGAGAAGAGGCTGCACCCCTTATTGAAGCTGCATATCAACAACGTTTAGTGGAAGAGAGACTTCTTCATGAGCGTGAACAACAGCAAGAAGTTGAAGTTAGCAAACAGAGGCATGAGGGAGATCTCAAAGAGAAGGAGAGGCTTGCACGAATGATGGGCAATAAGGAGATATATGAGGTCCGAGTTGTTAGTCATCGCCAAGCAGAGTTTAATAGATTGAGAAGAGAACGGGAAGAGCGAATCTCTAGGATTTTGCAGTCGAGGAGACAGGAGAGGGAAAAACTGAGGAAGTTGAAGTATTATCTGAAATTAGAAGAAGAGAGACAACAAAAAATGCATGAGGAGGAGGAAGCTCGGAAACGTGAAGAGGCTGAAAGGAGAAAGAAGGAAGAGGCTGAACGCTTAGCAAAACTGGCCGAAATAGCTGAAAAACAGAGGCAGAGAGAGCGGGAACTCGAGGAAAAGGAGAAACAAAGGAGAGAAGCATTGTTAGGCAGAGCTGCTGAACCAGCTCCTCCTGCTCGACCATTGGAATCTGTAACAGCTCCTGCTGCAGCAGCTGCAGCCGCTGCTGCTCCAACCCCTGGGAAATATGTGCCTAAGTTCAGGCGAACTGAAAGAACAGGAACTGATCCTCCTCCGGAAACAGACCGCTGGAGTAACAGTAGCAGCAGCAGGCAGGATGGTGACAGGTGGCGTAGTGATGATAAGAGAACTAGTTATGTTGCTGGTGGTGGAGGTTCAAGGTCATCTTCTTCTTGGTCCAGGAATCCCCGTTGA 2865 0.4293 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRVEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDRTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDVYHLLEHEFHPSDLALKALPLITKISKLGGKLSTASSVPEVQLSQYVPALERLATMRLLQQVSNVYQTMKIETLTGMIPFFDFSVVEKIAVDAVKQKFVSMKVDHMKNVVIFCKTSLESDGLRDHLANFAEQLNKARQMIYPPDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVEVSKQRHEGDLKEKERLARMMGNKEIYEVRVVSHRQAEFNRLRREREERISRILQSRRQEREKLRKLKYYLKLEEERQQKMHEEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKEKQRREALLGRAAEPAPPARPLESVTAPAAAAAAAAAPTPGKYVPKFRRTERTGTDPPPETDRWSNSSSSRQDGDRWRSDDKRTSYVAGGGGSRSSSSWSRNPR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1762 954 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Pvu1g1762 954 MobiDBLite consensus disorder prediction 939 954 - -
Pvu1g1762 954 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 902 IPR027512 GO:0005852
Pvu1g1762 954 SMART PINT_4 441 532 IPR000717 -
Pvu1g1762 954 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Pvu1g1762 954 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 927 IPR027512 GO:0005852
Pvu1g1762 954 Coils Coil 615 649 - -
Pvu1g1762 954 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 902 - -
Pvu1g1762 954 Coils Coil 667 697 - -
Pvu1g1762 954 MobiDBLite consensus disorder prediction 801 954 - -
Pvu1g1762 954 Gene3D UVR domain 217 268 - -
Pvu1g1762 954 Coils Coil 561 602 - -
Pvu1g1762 954 Gene3D - 269 342 - -
Pvu1g1762 954 Gene3D - 352 510 - -
Pvu1g1762 954 MobiDBLite consensus disorder prediction 801 859 - -
Pvu1g1762 954 Coils Coil 93 120 - -
Pvu1g1762 954 Pfam PCI domain 373 508 IPR000717 -
Pvu1g1762 954 Coils Coil 796 857 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1762 1 954 Eukaryotic Initiation Factors Gene Family AT4G11420 72.410 0.0 1334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1762 K03254 - gmx:100782598 1443.33