Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1744 ATGAATGGGGCTCAGAATAGGAAGGTTCACAATATTGAGAAACCTTTTCCAGGATGCTTGGGAAGAATGGTGAACCTCTTTGATTTGACTGGGGGTGTCAATGGAAACAAGCTACTCACGGACAGGCCTCACCGCGATGCATCATCACTTTCAAGAAGTCAATCAGATGTTGCAAGGATCACAAGTCCTACTTTGGGTGACCAGATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTTTGTCAAATAAGAAAATAAATGGAACACCCATTAAGATGCTCATAGACCAAGAAATGTCCAAAGAAGTTGTTTCAAAGCACAACCCACCACCAAATGTAGTTGCAAAATTGATGGGGCTTGAAGCCCTTCCACGGGGCGATCCTAATTTGTCTGTGGAGAGAAACCATAGAGGAGATTATTCTCAACATATGTGTGATCATTCAGGGACACCATTCAAACACTGGCAGATGGATGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCTGAACACAGAACAGATTGCTTACAAGGATATTTATGAAATATGGCTGCAATCACAAAGAACAGGCAATGTAAGAGACAAGACACCGGAGAGAGAAAGGTGGACTGAAGATGCTAATGGGAAGAAAATGGCTCTCATTCGTCAGAAGTTTATGGAAGCTAAACGTCTGTCTACAGATGAGAGACTACGCCAGTCCAAGGAGTTTGACGATGCCTTGGAAGTTTTAAGTTCAAATAATGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACTCCAGTAGCAGAGACTAAGCGCATTACTGTTCTTAAGCCTTCGAAGATGGTTGACAACGAAAATTCTGTTGGAAAGGGGAAGAAAAATGACAAGCAGATTAGGAAACCGGCAAATGTTGGTGCTGCATGGGAGAGATACAGTCCTGGATACACTCCTCCCTCTCAGAAAGTGGATGAGTTTCCAGTACAACCTACTCGTATAGTGGTATTGAAGCCCAGCCCTGGGAAGACACATGAGATTAAGGCTGTGGTTTCTCCAACAATGTTATCACCTCGGAATTTGCCAAGTGGAAATTTCTACCAGGAACCTGAGGATGATGTACATGAATCAAGAAAAATGGATAGTGAAATTACACAGCAAATGCATGAAGATATGAGGAGCCATCAAAGAGATGAAACATTCTATTCTTCAGTATTTTCCAATGGCTATACTGGCGATGAGAGTTCATTCAACAAATCGGATCATGAGTGTAATGCAGGGAACTTTAGTGATTTGGAAGTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATTAATCGCTGTGGCAGTCCTTTTTCTTCGTCATCCTTTAGCCGTGCATCCTGTTCTCCTGAGTCGTCTGTATGCAGAGAGGCCAAGAAACGACTTTCGGAAAGATGGGCTATGATGGCATCAAATAAAGGTCTTCAAGAACAAAGGCACATGCGCAGAAGCTCTACCTTAGGTGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGAAATATCTGAGCTTGAGGGTATTCATAAACAACAGGAACAAAGTGAATCTGTTTCTTGTAGTCGAAATTTTAATGCTGAAACATGTATGGATGGTTCTCCTAGAAACCTTTCCAGGTCAAAATCTGTTCCGACATCTTCCACTGTCTTTGATGATGCTCTCAGTGTTGGAGTTTGTGATAATGATGCTGGCAAAACACACGTGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTCACCAGTTTCTTCTCAAGGAGCAAGAAACCAACCAGGGAAAAATCTTGTCTATCTCAATCTAAAAATGAGTCCCAATCCACACTCACTGTAGCATCAGATTCTCCAGTACATTTATTTGGAGTCCTTAGGGATGATGTCTCTCAAAGCTTCAAAAGTGGATCCATTGGAGAGTGTTCTCTTCCAGCACCATATGAATCATCAGGCAAAATTTTCTCAGATTCTATCTCTAATGGACAAGGTGCTATACCTCTCGAGTCTGGATTGGCACTGTCAAAGCCCGTGGTGCCTTGGATTTCAAGTGAAAACCAGGGTCAGCCGAGTCCAATATCAGTTTTAGAGCCTCCATTTGAAGATGATAATGGTGCTAACGAGTCCTTGGGCTGTGGATTACGGGGCTCTCTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGGACCCTCTCATGGGATGATTCTTGTGCAGAGGTGGCAAATCCATACCAATTAAAGCCCTCGTTGGGTTCCTTAGATACCAAGGTAGAGGATCAAGACTGGCTTGTCTTTGTCGAGAAACTTCTATCAGCTGCTGGAATTGATGATCAAGTGCAGTCTGACTCCTTTTACTCTAGATGGCATTCCCTCGAAAGCCCATTGGATCCATCATTGAGGGACAATTATGCCAATCTGAATGACAAGGAGCCTCAGCAACTCCATGAGGCCAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTTGTATTCGAGTGTGTTAATTTGTCACTGATAGAAATTACTGGTTATGGATCACAGAGTTACTTGATGGGTAGGTTATGGAGTGGCAGCCACAGCAGATTCCAAGTCCCAGAGGGTGCACCTCCCCCTTTGGTAGACCTTGTTGTGGCCCAGATGAAGGAGTTAATATCCGGTGCTGTGAGGTCTGTTTGGGGGGACTGTGGGGACAGTAACAGCCTGGGGGTAGAGAGTGTTGTCAGGAAAGAGGTTGTGGGAAAAGGGTGGGTTGAGCTTATGGCATTAGAGATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCGGTAGTTGATTTGAATGGTTGA 2916 0.4311 MNGAQNRKVHNIEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARITSPTLGDQIEDKLIVSDSMRALSNKKINGTPIKMLIDQEMSKEVVSKHNPPPNVVAKLMGLEALPRGDPNLSVERNHRGDYSQHMCDHSGTPFKHWQMDDRFMDKEMLHEVHLNTEQIAYKDIYEIWLQSQRTGNVRDKTPERERWTEDANGKKMALIRQKFMEAKRLSTDERLRQSKEFDDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNENSVGKGKKNDKQIRKPANVGAAWERYSPGYTPPSQKVDEFPVQPTRIVVLKPSPGKTHEIKAVVSPTMLSPRNLPSGNFYQEPEDDVHESRKMDSEITQQMHEDMRSHQRDETFYSSVFSNGYTGDESSFNKSDHECNAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASNKGLQEQRHMRRSSTLGEMLALSDIKKSEISELEGIHKQQEQSESVSCSRNFNAETCMDGSPRNLSRSKSVPTSSTVFDDALSVGVCDNDAGKTHVSGELTKSKSMKSSFKGKVTSFFSRSKKPTREKSCLSQSKNESQSTLTVASDSPVHLFGVLRDDVSQSFKSGSIGECSLPAPYESSGKIFSDSISNGQGAIPLESGLALSKPVVPWISSENQGQPSPISVLEPPFEDDNGANESLGCGLRGSLKSNLIDKSPPIESIARTLSWDDSCAEVANPYQLKPSLGSLDTKVEDQDWLVFVEKLLSAAGIDDQVQSDSFYSRWHSLESPLDPSLRDNYANLNDKEPQQLHEAKRRQRRSNQKLVFECVNLSLIEITGYGSQSYLMGRLWSGSHSRFQVPEGAPPPLVDLVVAQMKELISGAVRSVWGDCGDSNSLGVESVVRKEVVGKGWVELMALEMDILVKEVEGKLLEELVEDAVVDLNG* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1744 971 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
Pvu1g1744 971 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 970 - -
Pvu1g1744 971 MobiDBLite consensus disorder prediction 38 57 - -
Pvu1g1744 971 Pfam Domain of unknown function (DUF4378) 786 964 IPR025486 -
Pvu1g1744 971 Pfam DUF761-associated sequence motif 111 125 IPR032795 -
Pvu1g1744 971 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1744 Pvu-Chr1 43026724 43032155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1744 1 970 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.856 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1744 - - var:108322999 1779.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1744 1 43026724 43032155 Pvu1g1744 1 43026724 43032155 ECH
Pvu1g1744 1 43026724 43032155 Pvu7g1602 7 37971514 37975894 PCT