Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1743 ATGGAGAACTTGTTTCGCCTGGTAGACCACGAAGACTTCTTCTCTCGTCGTTGCATTTGGGTGAACGGCCCTATAATTGTAGGGGCAGGTCCCTCAGGGCTTGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCCTTCGTGCTTCTGGAACGTGCAGATTGCATAGCCTCACTGTGGCAGAAACGCACCTATGACAGACTCAAACTTCACCTCCCTAAGCAATTCTGCCAGCTCCCCAAGCTCCCTTTCCCTGAAGACTTCCCCGAATACCCCACAAAGAAACAGTTCATAGAGTACCTGGAGTCCTACGCCAGGCACTTCGAGATCAACCCTCAGTTCAACGAGTGTGTTCAGTCCGCAAGGTACGACGAGACAAGCGGATTGTGGCGGGTGAAGACCGTTTCCTCCACTGGCGCCACACGCAACGAGGTGGAGTACATTTGCAGGTGGCTCGTGGTGGCCACTGGGGAGAATGCTGAGTGTGTGATGCCGGAGATTGAAGGATTGAGTGATTTCAAAGGTGAGATCATCCATGCTTGTGATTACAAGTCAGGGGAAAGCTTCAGGGGAAAGAAGGTCCTTGTTGTTGGCTGTGGCAATTCCGGCATGGAACTCTCTCTTGATCTTTGCAACCACCATGCTTCTCCTTCCATGGTTGTTCGCAGCTCGGTTCACGTGTTGCCTAGAGAAATATTTGGGAAATCAACGTTTGAATTTGCGGTTATGATGCTGCAATGGCTGCCCCTTTGGCTTGTTGACAAGATTATCTTGATCTTGGCATGGTTTGTTTTGGGGAACGTGGAGAAGTTGGGGCTGAAAAGGCCTGCAACGGGTCCTTTGGAGCTGAAGAACACAAAGGGGAAGACCCCGGTTTTGGATCTTGGTGCCTTGGAGAAGATTAGATCCGGTGAAATAAAAGTGGTGCCAGGAGTCAAGAGGTTCAATAATGGAGAAGCTGAGCTTGTCAATGGTGAAAAGCTTGATGTTGATGCAGTGGTGCTTGCAACCGGTTACCGCAGTAATGTTCCTTATTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCCAAGACGTCATTCCCTCATGGATGGAAGGGAAATGCTGGACTTTATGCTGTGGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTTTGAAAATTGCTCAAGATATTGGCAAAGTTTGGAAAAATGAGACTAAGCAAAAGAAACAGCGCACTACTGCTTGTCATAGAAGATGCATTTCTCAGTTCTAA 1272 0.489 MENLFRLVDHEDFFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFVLLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYARHFEINPQFNECVQSARYDETSGLWRVKTVSSTGATRNEVEYICRWLVVATGENAECVMPEIEGLSDFKGEIIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREIFGKSTFEFAVMMLQWLPLWLVDKIILILAWFVLGNVEKLGLKRPATGPLELKNTKGKTPVLDLGALEKIRSGEIKVVPGVKRFNNGEAELVNGEKLDVDAVVLATGYRSNVPYWLQEGEFFSKNGYPKTSFPHGWKGNAGLYAVGFTKRGLSGASSDALKIAQDIGKVWKNETKQKKQRTTACHRRCISQF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1743 423 Pfam Flavin-binding monooxygenase-like 26 346 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pvu1g1743 423 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 15 421 - -
Pvu1g1743 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 421 - -
Pvu1g1743 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 401 IPR036188 -
Pvu1g1743 423 Gene3D - 24 407 IPR036188 -
Pvu1g1743 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Pvu1g1743 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Pvu1g1743 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 299 IPR036188 -
Pvu1g1743 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Pvu1g1743 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1743 Pvu-Chr1 42987726 42989912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1743 K11816 - gmx:100819987 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1743 1 42987726 42989912 Pvu1g1743 1 42987726 42989912 ECH
Pvu1g1743 1 42987726 42989912 Pvu7g2460 7 47906858 47909264 PCT
Pvu7g1596 7 37912849 37914838 Pvu1g1743 1 42987726 42989912 PCT
Pvu7g1898 7 42072612 42081920 Pvu1g1743 1 42987726 42989912 PCT