Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1740 TGTGACCAAATCTGTACTGAACCGCTTACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAGGTCCGGCTTACACTGGATGTAGCACCTTATGCTGTTTTTCCAGTAATGACTGAGTTAGAGAATCAAATTGCATTAGGCACGTATCTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACAGTCAAAATCAGGGAAGAACTGTTGTTGATATTAACTTGGTTCCGCTGGGAGAGAAATTTGACAATACAACTGCAGCTTTGACATATGAGAGGTTTTGGCACAAGAAGGTTCCTCTAAATAGGAGCCTTTTTGGTGATTATGCTGTTGTGTACATTACTTATCCAGGAATGCCATCTTCGCCCCCATATGGATCTTTTGTTGGGAGTGGTCCCAGCCAAAGTGTTGAGGGCATTCTTCCGGTCAGTGCCAACTTTGTTAGCAAGAACCAGAAAATGAATGTCAAGACCATAATCATCATTGCTTTATCTTCATTTGTACTCTTGCTGGTTTTGGTGGGAGCATTTTCAATTATTTTGAAATGGAGGAAGACTAGGAGACCATCGAGTGCTGTTGGCCCTGCATTCACATCATCTCTGAACAAGAGATCAGGCTTGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCACTTATGTCCACAATGGCTACTTCCATTCTCTCTGTTAAAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTTAATTCAAAGAGAGTACTGGGCGAAGGAGGATTTGGACGTGTTTATAGTGGAACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTAACAAGAGATAATCAGAATGGAGACCGGGAATTTATTGCAGAGGTTGAGATGCTAAGCCGTTTGCATCACCGCAATCTAGTGAAACTGATTGGTATATGCATTGAGGGTCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTCGAGTCCCATCTGCATGGTGATGACAAGATGAAGGGGATGCTAGATTGGGAAGCACGGATGAAAATTGCCCTAGGAGCTGCAAGAGGATTGGCCTATCTTCACGAGGATTCCAATCCCCGTGTAATTCATCGAGACTTCAAAGCTAGTAACGTGTTACTAGAAGATGACTTTACTCCCAAAGTTTCTGATTTTGGATTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCAACACGAGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGGCATTTACTCGTCAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTCACAGGCAGAAAACCAGTGGATATGTCTCAACCTCAGGGACAGGAAAATCTTGTAACTTGGGCACGGCCAATGTTGACCAGTAGAGAAGGTCTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGTTGCTGCAATCGCTTCAATGTGTGTTCACACGGAGGTTACACAGAGACCTTTTATGGGTGAAGTTGTGCAAGCTCTTAAGTTAATATACAACGACACAGATGAGACATGTGGAGATTGTTGTAGTCAGAAGGATTCCTCTGCTCAGGAGTCCGATTTTAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCGGGAGGGTTAACCCCTCGATTAACTTATGGGCAAGCATCTTCCTTCATCACTATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACATCAAGCTTGATTGGAGATGAAATATCTTTAGCATTTAGGCATGGGAATAGATCAGGCCCCTTAAGAACAGTCCGAAGCAAGCTGTCCTTACATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGTAATTGGAATGATGGTTACTGGGTTTAA 1974 0.4362 CDQICTEPLTSTPFGSPCGCVFPMKVRLTLDVAPYAVFPVMTELENQIALGTYLEQSQVKIMGATADSQNQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAVVYITYPGMPSSPPYGSFVGSGPSQSVEGILPVSANFVSKNQKMNVKTIIIIALSSFVLLLVLVGAFSIILKWRKTRRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMATSILSVKTFSLSELEKATDKFNSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGDDKMKGMLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHTEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEISLAFRHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKRNWNDGYWV* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1740 657 Gene3D Phosphorylase Kinase; domain 1 225 329 - -
Pvu1g1740 657 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Pvu1g1740 657 Pfam Protein tyrosine and serine/threonine kinase 256 526 IPR001245 GO:0004672|GO:0006468
Pvu1g1740 657 SUPERFAMILY Protein kinase-like (PK-like) 232 529 IPR011009 -
Pvu1g1740 657 CDD STKc_IRAK 260 529 - -
Pvu1g1740 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Pvu1g1740 657 MobiDBLite consensus disorder prediction 636 657 - -
Pvu1g1740 657 ProSiteProfiles Protein kinase domain profile. 254 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1740 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 1 654 - -
Pvu1g1740 657 PANTHER OS01G0750732 PROTEIN 1 654 - -
Pvu1g1740 657 Gene3D Transferase(Phosphotransferase) domain 1 330 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1740 Pvu-Chr1 42916266 42919727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1740 4 646 Receptor kinase-like Gene Family AT5G56890 54.573 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu1g1740 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1740 - - pvu:PHAVU_001G1677000 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1740 1 42916266 42919727 Pvu7g1589 7 37787897 37795102 PCT