Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1729 GAAAAGGACGTGCAAGTTATGGAAGATGAACGCAAAGACAAAGAGAAACACGTAACAAACTCTGACTACTCGAGGACCCAATTGAAAGTACTTATTGTGGATGACGTTAGGGTTATTCGAATGACTCATAAAATGCTGTTGGACAGAGTTGGGGTAAAAGATCACGTTGCTGTGGAAAATGGCAAAGAAGCAGTTGAACTTCATAACAATGGTCAAAGTTTTGATCTGATTCTCATGGATAAGGACATGCCTGTCATGAATGGAATTGAGGCAACAAGGACACTTCGTTCAATGGGTATCAGTTGCAAGATCATTGGTGTGTCGTCATCAACCTGCAATCAGCTATATGTACAAGAATTTGTTGAAGCAGGGCTAAATGGCTTCTACACAAAACCCTTGACTGTTAAAATGCTTGGTGAAATTCTTGAGAAGATCAAGTCATGA 444 0.4009 EKDVQVMEDERKDKEKHVTNSDYSRTQLKVLIVDDVRVIRMTHKMLLDRVGVKDHVAVENGKEAVELHNNGQSFDLILMDKDMPVMNGIEATRTLRSMGISCKIIGVSSSTCNQLYVQEFVEAGLNGFYTKPLTVKMLGEILEKIKS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1729 147 ProSiteProfiles Response regulatory domain profile. 29 146 IPR001789 GO:0000160
Pvu1g1729 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 146 - -
Pvu1g1729 147 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g1729 147 CDD REC_hyHK_CKI1_RcsC-like 30 142 - -
Pvu1g1729 147 SMART REC_2 28 142 IPR001789 GO:0000160
Pvu1g1729 147 Gene3D - 5 147 - -
Pvu1g1729 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 10 146 - -
Pvu1g1729 147 Pfam Response regulator receiver domain 30 141 IPR001789 GO:0000160
Pvu1g1729 147 SUPERFAMILY CheY-like 27 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1729 Pvu-Chr1 42829256 42829852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1729 28 134 Response Regulator Gene Family AT3G04280 45.370 2.18e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu1g1729 Response_reg 6.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1729 - - var:108322984 159.458