Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1717 ATGGAAGAGGGTGGGGGTAGTTTAAGGATTGGAAGTTCATCCATTTGGAGGAACAGTGACGCGGAGATATTCTCAAACTCATTCGAACAACCGAACGATGAAGAGGCTCTCAAATGGGCTGCTATTCAGAAGCTTCCCACGGTTGCACGTTTGAGGAAGGCTTTGCTCACCTCACCTGATGGGAAAGCCAATGAGATCGATGTACAGAAACTTGGGTTGCAAGAAAAGAGAGCTTTACTTGAAAGACTGGTGAGAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGCTCAAGGACAGAATTGATAGAGTTGGAATTGATCTTCCTACCATAGAGGTTCGTTTTGAGAACTTGAACATCGAAGCAGAAGCTCGTGTAGGAACTAGAGCTTTGCCTACATTCACTAACTTCATAGTTAATATTGTGGAGGGCCTTATGAACTCTCTTCATATACTTCCAACCAGGAAACAACATCTAAACATTCTCCAGAATGTTAGTGGAAAAGTAAAGCCTGGCAGAATGACATTGCTTTTAGGCCCTCCAAGTTCTGGGAAAACCACACTCTTGTTGGCCTTGGCTGGAAAACTTGATCCAAAACTAAAGTTCTCTGGAAAGGTAACTTATAATGGTCACGGGATGAATGAGTTTGTACCCCAAAGAACTGCTGCTTATGTGAATCAAAATGATCTTCACACTGGAGAATTGACAGTTAGAGAAACCTTGGCCTTCTCCGCAAGAGTCCAAGGAGTTGGACCTCGTTATGACTTGCTAGCGGAATTGTCCAGAAGAGAAAAGGAGGCAAGCATCAAGCCTGATCCAGATATTGATGCCTACATGAAGGCTGTAGCATCTGAAGGCCAGAAGGCAAATATGATAACAGACTACATACTGAGGATTTTGGGACTAGAGGTTTGTGCTGATACCGTTGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAAGAAACGTGTTACAACAGGGGAAATGCTGGTTGGACCAGCTAAAGCTCTTTTCATGGATGAAATATCCACTGGGTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCACTCAAGCAATATGTTCACATTCTCAAAGGAACTATAGTCATCTCTCTCCTGCAACCAGCACCAGAGACATACAATCTATTTGATGACATTATTCTACTCTCTGATAGTCACATTGTGTATCAGGGTCCCCGTGAATACGTGCTTGAATTTTTCGAATTAATGGGTTTTAAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAGGATCAGGAGCAGTACTGGGCACACAAAGATCAGCCTTATAGATTTGTCACAGCCAAAGAGTTTTCAGAGGCACATAAATCATTTCATGTTGGGAGAAGCCTTGCTGAAGAACTTGCTACCGAATTTGACAAGTCTAAGAGTCACCCAGCTGCTTTGACAACCAAAAAGTATGGAGTGGGAAAATGGGAGTTGTTAAAAGCTTGCTTATCCAGAGAATATTTACTTATGAAACGCAATTCATTCGTTTACACCTTCAAGCTTTTCCAACTTGCAGTAATGGCAATTATTGCCATGACCATTTTCTTCCGGACTGAGATGCACAGAGATTCAGTGACTCATGGAGGCATATATGTGGGTGCCTTGTTTTATGGGGTTGTTGTGGCTATGTTCAATGGACTGGCTGAACTTTCCATGGTTGTTTCAAGGCTTCCTGTTTTCTACAAACAAAGGGATTATCTTTTTTTCCCTTCATGGGCATATGCTCTTCCTGCATGGATCCTAAAATTCCCTTTGACTTTTGTGGAAGTGGGTGTTTGGGTATTCCTTACCTACTATGTCATTGGTTTTGATCCATATGTTGGAAGATTGTGTAAGCAATACCTTGTTCTTGCACTAGTAAATCAAATGGCTTCGGCACTGTTCAGAGTAGTTGCAGCAATTGGGAGGGAAATGACAGTGGCTCTAACACTTGGGTCGTTTACACTGGCCATCCTTTTTTCTATGAGTGGTTTTGTCCTGTCAAAAGACAATATAAAAAAATGGTGGCTATGGGGCTTCTGGATATCACCTATGATGTATGGGCAGAATGCCATTGTAAATAATGAGTTTCTTGGGAAGAGATGGAGACATGTTCTACCTAACTCTACTGAGCCTCTAGGAGTTGAAATTTTGAAATCGCGGGGTTTCTTCACTCAGTCATACTGGTACTGGATAGGTGTTGGAGCTTTGATTGGATATACATTACTTTTCAACCTTGGCTACATCCTTGCCCTTAAATACTTAAATCCATTTGGGAAAGATCGGGCTGTTATATCAGAGGAACCTCAAAGTAATGACCAGAATAGAGGTAGTAAAAAGGGAACTAATGTGATGAAGAACACAAAACATAGCTTTTCTCAGCACTCAAATAGAGTGAGGAATGGTGAAAGTACAAGTGGAAGCACCTCTCCCCATACTTCATGTACTAGGAACGAAGAAGTTGATGCAGAGACAAATCATAACAGGAAAAGAGGAATGGTTCTTCCATTCGAACCTCATTCCATCACCTTTGATGATGTAACATATGCTGTCGACATGCCAGTGGAAATGAGGAACAGGGGTGTTGTTGAAGATAAATTGGTTCTTTTGAAGGGTGTCAGTGGAGCTTGCAGGCCAGGTGTTCTCACCGCCCTAATGGGTGTCACTGGTGCTGGGAAAACAACTCTGATGGATGTACTTGCGGGTAGAAAAACTGGAGGATATATTGGGGGAGATATCAGAATCTCTGGTTATCCAAAGAAGCAAGAAACATTTGCAAGGATTTCTGGATACTGTGAGCAAAATGATATCCACTCTCCTCATGTTACAGTATATGAATCCCTGCTTTATTCAGCGTGGCTTCGGTTGTCCCCAGAAATCAATGATGGAGCCAGGAAGATGTTCATTGAGGAAGTTATGGAACTTGTGGAACTGAAGCCACTGAGGCACGCATTAGTTGGATTGCCTGGTGTCAGTGGTCTCTCAACCGAGCAACGGAAAAGGTTGACAATTGCAGTTGAACTTGTAGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCGGGACTAGATGCAAGAGCTGCTGCGATTGTCATGAGAGCAGTTAGGAACACAGTAGACACTGGAAGAACAGTTGTGTGTACCATCCATCAGCCAAGCATAGATATATTTGAATCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGGCAAGAAATATATGTGGGGCCACTTGGACATCATTCTTCCCATTTAATTAGTTACTTTGAGGAAATCCAAGGTGTCAGTAAGATTAAAGATGGCTATAATCCAGCAACATGGATGTTGGAAGTCTCCACTTCAGCAAAAGAGATGGAATTGGGGATCGATTTTGCAGAGGTGTACAAAAGTTCAGAGCTATACAGGAGAAACAAAGGTCTTATTAAAGAATTGAGTACACCAGCTCCTGGTTCCAAAGACCTTTATTTTCCTTCACAATACTCAACTTCTTTCCTCACTCAATGCATGGCTTGCTTATGGAAACAACGTTGGTCTTACTGGCGCAATCCTCTATACACTGCCATTAGATTTCTGTACTCAACCGCTGTAGCTGCTGTGATCGGTAGCATGTTTTGGAACCTTGGCTCCAAAATTGACAAACAACAAGATCTTTTTAATGCCATGGGCTCCATGTATGCTGCTGTTCTTCTTATTGGCATTAAGAATGGTAATGCAGTGCAGCCAGTGGTTGCTGTTGAACGAACTGTCTTTTACAGGGAAAAAGCATCTGGAATGTATTCAGCTTTGCCATATGCTTTTGCTCAGGTTGTAATTGAGCTCCCATATGTTTTAGCACAAGCTGTGGTATATGGCATTATAATTTATGCCATGATTGGTTTTGAGTGGACTGTTGCTAAAGTTTTCTGGTACCTATTCTTCATGTACTTCACCTTCCTAACCTTCACCTACTATGGCATGATGTCAGTGGCAGTGACCCCAAACCAACACATTTCTTCTATAGTTTCCTCTGCATTCTATGCAGTGTGGAATCTCTTCTCAGGATTCATAGTCCCACGACCGAGAATGCCAGTGTGGTGGAGATGGTACAGTTGGATTAATCCGGTGGCATGGAGTTTGTATGGATTGGTGGCTTCACAATATGGAGATATACAGAAAAGCATGGAATCCAGTGACGGTAGAACAACAGTAGAAGGCTTTGTAAGAAGCTACTTTGGATTCGAGCATGATTTTCTTGGAGTGGTTGCAGCTGTGATTTTTGCATTCCCAGTGGTCTTTGCATTGGTCTTTGCTGTATCAGTGAAGATGTTCAATTTCCAACGCCGTTAA 4371 0.4214 MEEGGGSLRIGSSSIWRNSDAEIFSNSFEQPNDEEALKWAAIQKLPTVARLRKALLTSPDGKANEIDVQKLGLQEKRALLERLVRTAEEDNEKFLLKLKDRIDRVGIDLPTIEVRFENLNIEAEARVGTRALPTFTNFIVNIVEGLMNSLHILPTRKQHLNILQNVSGKVKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHGMNEFVPQRTAAYVNQNDLHTGELTVRETLAFSARVQGVGPRYDLLAELSRREKEASIKPDPDIDAYMKAVASEGQKANMITDYILRILGLEVCADTVVGNAMLRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTIVISLLQPAPETYNLFDDIILLSDSHIVYQGPREYVLEFFELMGFKCPERKGVADFLQEVTSRKDQEQYWAHKDQPYRFVTAKEFSEAHKSFHVGRSLAEELATEFDKSKSHPAALTTKKYGVGKWELLKACLSREYLLMKRNSFVYTFKLFQLAVMAIIAMTIFFRTEMHRDSVTHGGIYVGALFYGVVVAMFNGLAELSMVVSRLPVFYKQRDYLFFPSWAYALPAWILKFPLTFVEVGVWVFLTYYVIGFDPYVGRLCKQYLVLALVNQMASALFRVVAAIGREMTVALTLGSFTLAILFSMSGFVLSKDNIKKWWLWGFWISPMMYGQNAIVNNEFLGKRWRHVLPNSTEPLGVEILKSRGFFTQSYWYWIGVGALIGYTLLFNLGYILALKYLNPFGKDRAVISEEPQSNDQNRGSKKGTNVMKNTKHSFSQHSNRVRNGESTSGSTSPHTSCTRNEEVDAETNHNRKRGMVLPFEPHSITFDDVTYAVDMPVEMRNRGVVEDKLVLLKGVSGACRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPEINDGARKMFIEEVMELVELKPLRHALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEEIQGVSKIKDGYNPATWMLEVSTSAKEMELGIDFAEVYKSSELYRRNKGLIKELSTPAPGSKDLYFPSQYSTSFLTQCMACLWKQRWSYWRNPLYTAIRFLYSTAVAAVIGSMFWNLGSKIDKQQDLFNAMGSMYAAVLLIGIKNGNAVQPVVAVERTVFYREKASGMYSALPYAFAQVVIELPYVLAQAVVYGIIIYAMIGFEWTVAKVFWYLFFMYFTFLTFTYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIVPRPRMPVWWRWYSWINPVAWSLYGLVASQYGDIQKSMESSDGRTTVEGFVRSYFGFEHDFLGVVAAVIFAFPVVFALVFAVSVKMFNFQRR* 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1717 1456 Coils Coil 70 93 - -
Pvu1g1717 1456 MobiDBLite consensus disorder prediction 804 830 - -
Pvu1g1717 1456 MobiDBLite consensus disorder prediction 782 799 - -
Pvu1g1717 1456 Pfam ABC-2 type transporter 1181 1395 IPR013525 GO:0016020|GO:0140359
Pvu1g1717 1456 Pfam ABC-2 type transporter 499 711 IPR013525 GO:0016020|GO:0140359
Pvu1g1717 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 420 IPR003439 GO:0005524
Pvu1g1717 1456 Pfam Plant PDR ABC transporter associated 716 779 IPR013581 -
Pvu1g1717 1456 CDD ABCG_PDR_domain2 853 1091 IPR034003 -
Pvu1g1717 1456 Pfam ABC transporter 163 345 IPR003439 GO:0005524
Pvu1g1717 1456 Pfam ABC transporter 884 1036 IPR003439 GO:0005524
Pvu1g1717 1456 MobiDBLite consensus disorder prediction 804 845 - -
Pvu1g1717 1456 Gene3D - 149 463 IPR027417 -
Pvu1g1717 1456 MobiDBLite consensus disorder prediction 780 799 - -
Pvu1g1717 1456 Pfam ABC-2 type transporter 378 483 IPR043926 GO:0140359
Pvu1g1717 1456 PANTHER ATP-BINDING CASSETTE TRANSPORTER 6 1456 - -
Pvu1g1717 1456 MobiDBLite consensus disorder prediction 831 845 - -
Pvu1g1717 1456 Gene3D - 867 1100 IPR027417 -
Pvu1g1717 1456 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 6 1456 - -
Pvu1g1717 1456 SMART AAA_5 893 1085 IPR003593 -
Pvu1g1717 1456 SMART AAA_5 172 397 IPR003593 -
Pvu1g1717 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 856 1109 IPR003439 GO:0005524
Pvu1g1717 1456 Pfam ABC-transporter N-terminal 87 138 IPR029481 -
Pvu1g1717 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 420 IPR027417 -
Pvu1g1717 1456 CDD ABCG_PDR_domain1 152 402 IPR034001 -
Pvu1g1717 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 1092 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1717 Pvu-Chr1 42635632 42643396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1717 868 1068 Calmodulin-binding Proteins AT2G36910 26.697 8.27e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1717 K08711 - gmx:732607 2626.66