Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1715 ATGGCCGTCGATGAAATTGGAATCTCGTCTCCGACGTCGTTTTTTTCTTCTTATTCTTCGGGATCGTTTGAGAGCCGTTGGACCGCGATCCTTGGATTGCCTTGGGTGGAAGTGGTGGCAATCTGTGCCAACTTGACACTGTTTATTGTGTTTGTGTTCGTTCTTTTGGCGAGGAGGGTGGTTGTGTGTGTAGGGGGTGGAGTTAGATTTGGTAAGGACGATGGAACTGGCAATGCCAGCCGCGGCTGTGATAGTGTTGATTTGGAAACTCGTGACGTTCGGATTGGAACGTGGTTCAAGTGGTCGGTGTTCTCTTGTTTCTATGTTCTGTTGGTGCAAGTTTTGGTGTTTGCGTTTGATGGGTTTGCTTTGTTTAGAGAAAGGGATGTGGATTTGGATTGGGGTTTGGCTCTTCTTTCTGCGCCTCTAGCGCAGGGTTTAGCTTGGATTGCTTTGAGCTTCTCGGCTTTGCAGTGCAAGTTCAAGGCGCTTGAGAGGTTTCCAATTTTGCTCAGAGTTTGGTGGTTTGTGTTGTTTGTTATTTGTTTGTGTGGTTTGTATGTTGATGGGAGGGGGGTTTGGATGGAAGGTTCCAAGCACCTGCGTTCTCATGTTGTGGCGAATTTTGCGGTCACTCCTGCTCTTGGGTTTTTGTGTATTGTTGCAATTAGGGGTGTTACTGGTATAAAGGTTTGTAGGATTTCTGAGGAGCAACAGCCATTGCTTGTTGAGGAAGAACCGGGGTGTCTTAAGGTTACTCCCTATAATGATGCTGGACTTTTTAGCTTGGCCACTTTGTCTTGGTTGAATCCCCTGCTTTCCATTGGGGCAAAAAGGCCTCTTGAGCTTAAGGACATTCCCCTTGTTGCTCCTAATGACCGATCCAAGACAAATTATAAGATTTTGAATTCTAATTGGGAGAAATTGAAGGCAGAAAACACATCCAGGCAGCCTTCATTAGCTTGGGCGATTCTCAAGTCATTCTGGAAGGAGGCGGCTTGTAATGCCATATTTGCTGGTGTCACCACTCTTGTCTCGTATGTTGGTCCATACATGATAAGTTACTTTGTTGATTTCTTAGTTGGCAAAGAGATATTCCCACATGAGGGGTATGTTCTTGCAGGGATATTCTTTTCGGCTAAGCTTGTGGAGACCTTCACTACTAGGCAGTGGTATATAGGGGTGGACATCATGGGTATGCATGTTAGGTCGGCTCTAACTGCAATGGTATATCGGAAGGGGTTAAGGATATCAAGCTTGGCCAAGCAAAGTCACACAAGTGGGGAAATTGTTAACTACATGGCTATTGATGTTCAGAGGGTTGGGGACTACTCTTGGTATCTCCATGACATGTGGATGCTTCCTCTCCAGATTGTTCTTGCCCTGGCAATTTTGTATAAGAATATTGGAATTGCCTCTGTTGCCACGCTGATTGCTACAATAATTTCCATTATCGTCACTGTTCCTGTGGCCAGGATCCAGGAAGACTATCAAGACAGATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCCGAGTGCTTGAGGAATATGAGGATTCTCAAACTTCAAGCTTGGGAGGACAGATATAGAGTGATGTTGGAGGATATGCGTGGAGTAGAATTCAAGTGGCTTCGGAAAGCCCTCTATTCTCAGGCTTTCATAACTTTTATGTTCTGGAGCTCTCCTATATTTGTTTCAGCAGTCACTTTTGCTACTTCCATATTGTTGGGTGGTCAGCTGACTGCTGGTGGTGTACTTTCTGCTCTGGCTACTTTCAGGATCCTGCAAGAACCTTTGAGGAATTTTCCAGACTTGGTGTCAACAATGGCTCAAACGAAAGTTTCTCTAGATCGGTTATCTGGTTTCCTTCTGGAGGAAGAATTGCAGGAAGATGCAACTGTTGCCATGCCACAAGGCATCACTAACATTGCTTTAGAAATTAAGGATGGTGTGTTCTGTTGGGACCCTTTATCTTCTAGACCTACCCTATCAGGGATAAGTATGAAAGTTGAAAAAAGAATGCGCGTGGCTGTTTGTGGTATGGTTGGCTCTGGGAAATCAAGCTTTCTGTCTTGCATCCTTGGAGAAATTCCTAAGACTTCTGGGGAAGTCAGAGTGTGTGGATCTTCTGCATATGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATCCTCTTCGGAAGCCCAATGGACAAAGCAAAGTACAAGAACGTTCTTCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTTTCACATGGTGATCAGACAATTATTGGTGACAGAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCTCGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGTGCAGTTGATGCTCACACAGGATCTGACTTGTTTAGGGATTATATATTGACAGCACTAGCAGATAAAACAGTCATTTATGTGACCCACCAAGTTGAATTTCTACCCGCTGCTGATTTGATACTGGTGCTTAGAGAAGGCTGCATCATACAGGCAGGAAAGTATGATGACCTTTTACAAGCAGGAACAGATTTCAATATTCTAGTTTCAGCTCATCATGAAGCCATAGAGGCTATGGATATCCCTACTCACTCCTCTGAAGATTCAGATGAAAATTTATCTCTTGAGGCATCTGTTATGACCAGTAAGAAGTCCATTTGTTCTGCAAATGATATAGACAGTTTGGCCAAGGAAGTACAAGAAGGAGCATCTACTTCAGCTCAAAAGGCAATTAAGGAAAAGAAGAAAGCAAAGAGATTGAGGAAGAAACAGCTTGTTCAGGAAGAAGAGAGGATTAGAGGTAGAGTCAGTATGAAGGTCTACTTGTCATACATGGCAGCCGCATATAAAGGCTTGTTAATTCCTCTCATAATCATTGCGCAAGCATTATTTCAGTTCCTTCAGATTGCTAGCAATTGGTGGATGGCTTGGGCTAACCCTCAAACAGAAGGAGACCTGCCCAAAGTAACCCCCTCAGTTCTTCTTCTTGTATATATGGCCCTTGCTTTTGGTAGCTCATGGTTTATATTTTTAAGGTCTGTTCTGGTGGCTACATTTGGCCTTGCAGCTGCACAGAAGCTATTTTTGAAATTGATTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATAGGGTATCAATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGTGGGTTTGCTTCAACAACAATACAACTTATTGGTATTGTTGCGGTAATGACAGAAGTTACATGGCAAGTTCTACTCTTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCATCCTCCAGGGAACTGGTTCGTATTGTTAGCATCCAGAAGTCTCCAATTATACATCTTTTTGGTGAGTCAATTGCTGGAGCATCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGTTTTGCACGACCATTCTTCTGTAGTCTTTCTGCAATTGAGTGGCTTTGCCTGCGGATGGAGTTACTGTCAACCTTTGTATTTGCTTTCTGCATGGTATTGCTTGTGAGTTTTCCTCGAGGAACTATCGACCCCAGCATGGCTGGACTTGCTGTGACATATGGCCTAAATTTAAATGCACGCTTATCACGGTGGATACTCAGCTTTTGCAAACTTGAAAATAAAATTATATCCATTGAGAGAATATATCAGTACAGCCAAATTCCTAGGGAAGCACCCACTATAATTGAAGATTCTCGCCCTCCATCCTCATGGCCAGAAAATGGGACAATCGAAATAATTGATTTGAAGGTCCGTTACAAGGAGAATCTTCCTTTGGTGCTTCATGGAGTAACATGCACATTTCCTGGTGGAAAGAAGATCGGAATAGTTGGACGAACAGGAAGTGGAAAATCTACCTTAATTCAGGCATTATTTCGATTGATTGAACCAACTAGTGGAAGTATCCTTATAGACAACATAAATATTTCAGAGATTGGCCTTCATGATCTTCGAGGCCATCTCAGTATCATCCCACAAGATCCAACTTTATTCGAAGGGACCATTAGAGGCAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGAGATTTGGGAGGCACTTGACAAGTCTCAGCTTGGAGAGGTTATCCGTGATAAAGGACAACAGCTTGATACACCAGTTCTAGAAAATGGAGATAATTGGAGTGTAGGACAGCGACAACTTGTTGCTCTGGGCCGAGCACTGCTGCAGCAGTCAAGAATACTTGTACTGGATGAAGCAACAGCATCAGTTGATACCGCCACAGATAATCTTATCCAGAAGATTATCCGAAGTGAGTTCAAGAACTGCACTGTCTGCACCATTGCACATCGTATACCTACTGTCATCGACAGTGATCAAGTTCTTGTGCTCAGTGATGGTCGAGTTGCAGAGTTTGACACACCTTCAAGACTATTAGAGGACAAGTCTTCCATGTTTCTGAAGTTGGTGACTGAGTATTCATCACGTTCGAGTGGTATACCAGAATTTTAG 4617 0.4323 MAVDEIGISSPTSFFSSYSSGSFESRWTAILGLPWVEVVAICANLTLFIVFVFVLLARRVVVCVGGGVRFGKDDGTGNASRGCDSVDLETRDVRIGTWFKWSVFSCFYVLLVQVLVFAFDGFALFRERDVDLDWGLALLSAPLAQGLAWIALSFSALQCKFKALERFPILLRVWWFVLFVICLCGLYVDGRGVWMEGSKHLRSHVVANFAVTPALGFLCIVAIRGVTGIKVCRISEEQQPLLVEEEPGCLKVTPYNDAGLFSLATLSWLNPLLSIGAKRPLELKDIPLVAPNDRSKTNYKILNSNWEKLKAENTSRQPSLAWAILKSFWKEAACNAIFAGVTTLVSYVGPYMISYFVDFLVGKEIFPHEGYVLAGIFFSAKLVETFTTRQWYIGVDIMGMHVRSALTAMVYRKGLRISSLAKQSHTSGEIVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNIGIASVATLIATIISIIVTVPVARIQEDYQDRLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVMLEDMRGVEFKWLRKALYSQAFITFMFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSGFLLEEELQEDATVAMPQGITNIALEIKDGVFCWDPLSSRPTLSGISMKVEKRMRVAVCGMVGSGKSSFLSCILGEIPKTSGEVRVCGSSAYVSQSAWIQSGTIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFRDYILTALADKTVIYVTHQVEFLPAADLILVLREGCIIQAGKYDDLLQAGTDFNILVSAHHEAIEAMDIPTHSSEDSDENLSLEASVMTSKKSICSANDIDSLAKEVQEGASTSAQKAIKEKKKAKRLRKKQLVQEEERIRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFLRSVLVATFGLAAAQKLFLKLIRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVAVMTEVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLSAIEWLCLRMELLSTFVFAFCMVLLVSFPRGTIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPREAPTIIEDSRPPSSWPENGTIEIIDLKVRYKENLPLVLHGVTCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPTSGSILIDNINISEIGLHDLRGHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEVIRDKGQQLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRSEFKNCTVCTIAHRIPTVIDSDQVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPEF* 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1715 1538 Gene3D - 1275 1528 IPR027417 -
Pvu1g1715 1538 Gene3D - 642 875 IPR027417 -
Pvu1g1715 1538 CDD ABC_6TM_ABCC_D2 973 1267 IPR044726 GO:0140359
Pvu1g1715 1538 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524
Pvu1g1715 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1283 1522 IPR027417 -
Pvu1g1715 1538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 867 IPR027417 -
Pvu1g1715 1538 Gene3D ABC transporter type 1, transmembrane domain 934 1273 IPR036640 GO:0005524|GO:0016021
Pvu1g1715 1538 Gene3D ABC transporter type 1, transmembrane domain 301 630 IPR036640 GO:0005524|GO:0016021
Pvu1g1715 1538 CDD ABCC_MRP_domain2 1290 1510 - -
Pvu1g1715 1538 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1292 1526 IPR003439 GO:0005524
Pvu1g1715 1538 SUPERFAMILY ABC transporter transmembrane region 972 1272 IPR036640 GO:0005524|GO:0016021
Pvu1g1715 1538 SUPERFAMILY ABC transporter transmembrane region 322 627 IPR036640 GO:0005524|GO:0016021
Pvu1g1715 1538 Pfam ABC transporter 1309 1457 IPR003439 GO:0005524
Pvu1g1715 1538 Pfam ABC transporter 665 799 IPR003439 GO:0005524
Pvu1g1715 1538 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 975 1245 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g1715 1538 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 97 1538 - -
Pvu1g1715 1538 CDD ABC_6TM_ABCC_D1 334 621 IPR044746 GO:0140359
Pvu1g1715 1538 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 97 1538 - -
Pvu1g1715 1538 SMART AAA_5 674 855 IPR003593 -
Pvu1g1715 1538 SMART AAA_5 1318 1503 IPR003593 -
Pvu1g1715 1538 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 336 613 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g1715 1538 Pfam ABC transporter transmembrane region 337 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g1715 1538 Pfam ABC transporter transmembrane region 975 1217 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g1715 1538 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 647 870 IPR003439 GO:0005524
Pvu1g1715 1538 CDD ABCC_MRP_domain1 647 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1715 Pvu-Chr1 42592897 42601687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1715 661 863 Calmodulin-binding Proteins AT2G36910 31.081 3.76e-19 92.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1715 1 42592897 42601687 Pvu7g1581 7 37676371 37684835 PCT