Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1703 ATGGCGCCGAATCCAAGAGTGACAGCGGCGTTTTCGGCAATGGCAAATATCGGGATTCATGAATCAAAAGTGAAACCAGTGTTGAAGAGGCTGCTTAAATTGTATGATAAAAACTGGGAACTCATTGAAGAAGAGAGTTACAGGGCTCTGGCTGATGCAATATTTGAGGAGGAAGAAAATAAGTTGCTGGAGCCAGACCAGAGTAACAAAAACAAGAAGGATAGAGAAGTAGACGATGAAGAAGCTCATATGCTTGAGGAGCCTTTACGACCTTTGAAGAGGTTGCGTTTGAGAGGCCAAGAGGGTCAATCTTCACGCCCTCTAACTAGTCCTGTCCACAATTTAGCCTCCTTTCCGTTGAAAATTCCAAAATTGGAAGATGGCACAGTGCCTGAAATTAGTCCCAGGCTGCAGCCTCAAAGCAGGGCTGCATTATCTGATGGAAATGCAAGGCATGATGCTCCTCATGTTCCCCCACAAGATGTTATTGTCAACAAGGGAAAGCAACCTGTATCACCTCAAGTTACACCCAGAGGGGGAAGGTCTATGTCTGACCATACTTCCCTTGCAGAACCACTGAAAGAGTCACCAGCTGAACCACGAGCTGCTCCGTTGGTCAATAACAAAATGATTGTTCCATTTACTTTTATCAAGCCCAAGGATGAGCCTGTTGATCATTTGCCAGATTGTGAGATTCCCCTTGCTGTGATCCCTTATGAACCACCAAGTGGAGGAGACTCTCTAATGGGTGCAGCTGAAAAGAAAGATGACCACGATACTATGGTATCACAGTGCAGAGATGAAGACGTTGAGCATGAATATACTATTTTGTCCTCAATTGAAGAACCAACTTCTGATGTAGATGTAGCATTGCCATCTATAGGAGAGGAACAATGTGTAAAGATAACACAAACTGATGATGTTTCAAAGGAATCCGAGACCAATGTTTCACCCATTGTGAGAGAAAATAAAGATCCAGTCATGGCAAATGGGTCAATCAGTGTTAGGTCTTCTCCTTCCTTGGCTGAACCTGAAGGTCCTAGTTCTCTACCCTACCCAAGTGATCAGGATGATGCTGTACTAGCTTCCAAGAAGTTTGGGACGAATGGTTTCTTACAAAGTAATGGTGGGAAGGAGCTAGAGGATCCTGTACCCGCATATTCAGGTACCTTAGTGGTTGTTCCAAAATGTCAACTTACAACTGAAAATGATGCAAGGGCTGTTCACAATGTTAATGACCTAGCAAAGGGTGAAGAAAGAGTGAATATTTCATGGGTGAATAACACTACTAATGATCTTCCTCCACCCTTTCACTACATACCCCAAAACCTTGTGTACCGAAATGCTTGTGTTAATTTTTCTCTATCTCGTATTGGGAATGGGGATTGTTGTTCAACTTGTAAGGGCAATTGTGTATTGTCATCAAAACCATGTCCTTGTACAAATAAAACTGGGGGTGAATTTGCTTTTACTGCACAAGGCCTGCTAAAGGAAGCGTTCTTGGATGAATGTATCGCCATCAACCGCGATTCCCAAAATTATTTCTATTGCAAAGCTTGTCCGTTCGAACGATCAAAGAATGATGATTGTTTAGAACCATGTAAAGGACACCTAAAGCAGAAGTTTATCAAAGAGTGCTGGAGCAAATGTGGCTGTGGAAAACAGTGTGGCAACCGGGTTGTCCAGCGTGGAATAAGTTGCAAGTTGCAGGTGTTTTTAACTTCAGACGGAAAAGGGTGGGGTCTTCGAACCTTAGAGGATCTTCCAAAAGGCACATTTGTATGCGAGTTCGTTGGGGAAATTTTAACTGTCAAAGAGTTGCACGAGAGGAACATGAAAAATCCAAAAAGTGGGAAATATACTTTCCCAGTTTTATTGGATGCAGATTGGGATTTAGGAGTTGTGAAGGATAGGGAAGCTCTTTGCTTATATGCGGCATCATATGGAAATGCTGCTAGATTTATTAATCACAGATGCTTGGATGCAAACTTGATTGAGATCCCAGTTGAAGTTGAGTGCCCAACTCATCAGTACTATCATTTTGCGTTCTTTGCATCCAGAAAAATAGCAGCCCAAGAAGAACTCACTTGGGATTACGGCATCAACTTTGATGATGACGATGAGTCTGTTGAGCTTTTCCGGTGCAGATGTGGCAGTAAATTCTGCAGGAATATTAAGCGATCAAATAGATCCCTCAGATCGTGA 2205 0.4277 MAPNPRVTAAFSAMANIGIHESKVKPVLKRLLKLYDKNWELIEEESYRALADAIFEEEENKLLEPDQSNKNKKDREVDDEEAHMLEEPLRPLKRLRLRGQEGQSSRPLTSPVHNLASFPLKIPKLEDGTVPEISPRLQPQSRAALSDGNARHDAPHVPPQDVIVNKGKQPVSPQVTPRGGRSMSDHTSLAEPLKESPAEPRAAPLVNNKMIVPFTFIKPKDEPVDHLPDCEIPLAVIPYEPPSGGDSLMGAAEKKDDHDTMVSQCRDEDVEHEYTILSSIEEPTSDVDVALPSIGEEQCVKITQTDDVSKESETNVSPIVRENKDPVMANGSISVRSSPSLAEPEGPSSLPYPSDQDDAVLASKKFGTNGFLQSNGGKELEDPVPAYSGTLVVVPKCQLTTENDARAVHNVNDLAKGEERVNISWVNNTTNDLPPPFHYIPQNLVYRNACVNFSLSRIGNGDCCSTCKGNCVLSSKPCPCTNKTGGEFAFTAQGLLKEAFLDECIAINRDSQNYFYCKACPFERSKNDDCLEPCKGHLKQKFIKECWSKCGCGKQCGNRVVQRGISCKLQVFLTSDGKGWGLRTLEDLPKGTFVCEFVGEILTVKELHERNMKNPKSGKYTFPVLLDADWDLGVVKDREALCLYAASYGNAARFINHRCLDANLIEIPVEVECPTHQYYHFAFFASRKIAAQEELTWDYGINFDDDDESVELFRCRCGSKFCRNIKRSNRSLRS* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1703 734 MobiDBLite consensus disorder prediction 303 357 - -
Pvu1g1703 734 MobiDBLite consensus disorder prediction 330 344 - -
Pvu1g1703 734 CDD SET_SETDB-like 435 700 - -
Pvu1g1703 734 Pfam Pre-SET motif 415 559 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu1g1703 734 ProSiteProfiles SET domain profile. 567 700 IPR001214 GO:0005515
Pvu1g1703 734 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 734 - -
Pvu1g1703 734 Gene3D - 1 60 IPR043017 -
Pvu1g1703 734 MobiDBLite consensus disorder prediction 167 183 - -
Pvu1g1703 734 MobiDBLite consensus disorder prediction 241 261 - -
Pvu1g1703 734 SMART set_7 567 706 IPR001214 GO:0005515
Pvu1g1703 734 MobiDBLite consensus disorder prediction 126 198 - -
Pvu1g1703 734 Pfam SET domain 579 700 IPR001214 GO:0005515
Pvu1g1703 734 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 733 IPR025776 -
Pvu1g1703 734 ProSiteProfiles Pre-SET domain profile. 463 564 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu1g1703 734 SUPERFAMILY SET domain 421 723 IPR046341 -
Pvu1g1703 734 MobiDBLite consensus disorder prediction 61 94 - -
Pvu1g1703 734 SMART preset_2 411 551 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu1g1703 734 Gene3D SET domain 414 725 IPR046341 -
Pvu1g1703 734 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 734 - -
Pvu1g1703 734 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1703 Pvu-Chr1 42497653 42503349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1703 543 725 C2H2 Transcription Factor Family AT2G23740 38.919 1.46e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu1g1703 Pre-SET 6.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1703 - - var:108323268 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1703 1 42497653 42503349 Pvu1g1703 1 42497653 42503349 ECH
Pvu1g1703 1 42497653 42503349 Pvu7g2480 7 48063859 48066191 PCT
Pvu7g1950 7 42607413 42616051 Pvu1g1703 1 42497653 42503349 PCT