Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1698 ATGACAACTTTCCAAAAGGTTCATGCTCTAGTCTTTCATATACTCATGCTTTTTTTGCTTCCATTGAGAATCGCTTCATCACCAAGAGCAGAAGCAGAGGCCCTTGTCAAATGGAAAAACACTCTATCCCCACCTCTTCCTCCTTCTCTAAACTCATGGTCCCTCACCAACCTTCCCAACCTTTGCATTTGGGATGCCATTGTTTGTGACAACACCAACACAACAGTCTCAGAGATAAACTTGTCTGGTGCCAATCTCACTGGGACTCTCTCTGCTTTGGATTTTGCTTCCCTCCCTAACCTCACCCAACTCAACCTCAATGCCAACAATTTTGAGGGGTCAATACCATCCACAATTGGCAAACTCTCCAAGCTCACACTATTGGACTTGGGGAACAACTTATTTGATCACACTCTGCCTGATGAGCTAGGTTGGCTAATGGAGCTTCAATATCTCAGTCTTTACAACAACAATCTTAATGGCATCATTCCTTATCAGATCATGAATCTCCCTAAGGTATGGTACATGGACCTTGGTTCAAATTACTTTATAACTCCTCCTGACTGGTCCCCATATTCATGCTTGCCTTCCTTGACACGCCTTGCTTTACATCTAAATCCATCATTGACTGGTGAATTCCCAAGTTTCATACTCAAGTGCCATAACTTGACATACCTTGACATCTCTCAGAATGGTTGGAATGGCACTATACCAGAATCCTTGTATAGCAATTTGGGCAAGCTAGAATACCTCAACCTCACCAACTGTGGGTTCGAAGGAAAATTGTCACCCAACATGTCCATGCTTTCTAATCTCAAAGAACTTCGTATAGGCCAACTCACGGAGCTATGGCATCTTGATCTTGGTAAAAATTATTTTAACTCTACAATCCCTTCGGAGCTTGGCCTATGCACAAATCTATCCTTCTTGAGTTTAGCAGTGAATGATTTGACTGGTCCTCTGCCCTTGTCATTGGCTAGTCTCTCTAGAATATCAGAATTGGGGATATCAGATAATTCCTTTTCTGGTGAACTTTCTCCTTCACTCATCTCTAACTGGACGCAGTTGATTTCCTTGCAACTCCAAAACAATAACTTTACAGGAAAGGTTCCTACACATATTGGCCTGTTGAAAAAAATTAACTTCCTCTATCTGTACAGTAATCAATTCTCAGGTCCCATTCCAGTAGAGATTGGAAACCTGAAGGAAATGACAGAGTTAGACCTTTCACAAAACCAATTCTCTGGCCCACTTCCATCAACTCTTTGGAGTCTGACAAACATTCAAGTCATGAATCTTTTCTTCAATCAGCTCTCTGGAACCATTCCCACTGATATTGGAAACTTGACCTCACTGCAAATCTTTGATGTCAATAACAATAACTTGTATGGGGAGTTGCCAGAAACCATTGCTCAACTAACTGCTTTAAGTAATTTTTCTGTGTTCAGCAATAACTTCACTGGCAGCATTCCTAGAGAATTTGGAAAGAGTAATCCTTCTTTGGCTCATGTCTACCTTTCAAACAACAGTTTTTCGGGAGAACTGCCTCCTGACATATGCAGTGGGGGCAATCTAACTATTTTGGCAGTCAATAACAACAGCTTTTCGGGGCCACTGCCAAAGTCATTGAGAAATTGTTCATCGCTTACTAGAGTTCGGCTTGATGATAACCAGCTCACTGGAAATATCACAGATGCATTTGGGGTTCTCCCAATTCTTATTTTTATCTCACTTACTAGAAATCAACTTGTTGGTGAGCTCTCCCCGGAGTGGGGTGAGTGTGCCAACTTAACCAGTATGGATATGGGAAGCAACAAACTTTCTGGAAAAATTCCTTCTGCGCTAAGTAAGTTGAGTCAATTAAGGTATCTAAGCCTTCATTCCAATGATTTCACTGGTAGTATCCCACCTGAAGTCGGAAATCTAAGCCTGCTTTTCACGTTCAATCTGAGCAGTAACCATTTATCGGGAGAAATCCCAAAGAGTTACGGGAGATTGGCTCAGCTAAATTTTCTTGATTTATCAAATAACAACTTCAGTGGAAGCATTCCTAAAGAGCTTGGTGATTGTGATCGCTTACTGAGCCTGAATTTAAGTCATAACAGTCTATCTGGGGAGATACCAAATGAACTTGGCAAACTGTTCTCACTGCAAATCATGTTGGACATCAGCAGCAACTCTCTATCTGGGCCTCTTCCCCAAAACCTTGGAAAGTTAACCACATTGGAGATTCTCAATGTGTCACACAACCATCTATCAGGGACAATCCCACAATCTTTTTCAACCATGCTCAGCCTTCAATCTGTTGATTTTTCTTACAACAAATTGAGTGGTTCAATCCCCACTGGTCGTGTTTTCCAGACAGCGACTGCGGAAGCCTATGCTGGGAACTCAGGTTTGTGTGGTGACATAAAAGGATTAACTTGCCCCAAATCATTTTCCCCAGACAAATCCGGAGGAGTAAAGAATAAGGTTCTTCTTGGTGTTATCATACCAGTTTGTGCCTTATTTATGGTGATAATTAGTGTTGGAGTAATACTTGGTCGAAGGCATGACAAAAAACACCTTGATGAAGAGTCCAAAAGAGTTGAAAAAAGTGACCAGCCTATTAGCGTGGTGTGGGGAAGAGATGGAAAATTCACGTTTTCTGATCTCGTTAAGGCCACCGATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTATAGAGCACAATTACTCACAGGTCAAGTTGTTGCTGTGAAGAGGCTCAACGTATCAGACTCTGAAGACATTCCAGCAATGAAGCGCCAGAGCTTTTTGAATGAGATAAAATCACTTACAGGAGTGAGGCACCGCAATATAATAAAGCTTTATGGGTTCTGTTCTTGCAGGGGACAAATGTTCTTGGTTTATGAATATGTAGACAGAGGAAGTTTGGCAAAAGTGCTATATAGAGAGGAAGAAAATATGGAGCTAATGTGGGGCACAAGGCTAAAAATTGTGCAAGGAATAGCACATGCAATTTCATACCTGCACACTGATTGCTCCCCACCAATCTTGCACCGGGATGTTACACTGAATAACATATTACTAGACTCCGACTTAGAACCTCGTCTTGCAGATTTTGGCACAGCAAAACTGCTAAGCTCGGACACTTCAACTTGGACCTCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGAGTTACTGAGAAGTGCGACGTGTATAGTTTTGGGGTGGTGGTGATGGAGATAATGATGGGAAAGCATCCTGGAGAACTCTTGAGCACACTGTCTTCAAAGAACTATTTGTCATCAATGGAGGAAGAACCACAGGTGGAATTGAAGGAGGTGCTAGACCAAAGGCTTCCACCTCCAACAGGCCAATTAGCAGAAGCAGTAGTGTTCACAATGACTATAGCTTTGGCATGCACACATGCTGCTCCAGAGTCCAGACCCATCATGCGTGCTGTGGCACAAGAGCTATCGGCTACTACTCAGGCATATCTTTCCCAGCCATTTGGCATCATAACCATGAACAAGCTTAGAGGGTTACCGAAATAG 3579 0.4241 MTTFQKVHALVFHILMLFLLPLRIASSPRAEAEALVKWKNTLSPPLPPSLNSWSLTNLPNLCIWDAIVCDNTNTTVSEINLSGANLTGTLSALDFASLPNLTQLNLNANNFEGSIPSTIGKLSKLTLLDLGNNLFDHTLPDELGWLMELQYLSLYNNNLNGIIPYQIMNLPKVWYMDLGSNYFITPPDWSPYSCLPSLTRLALHLNPSLTGEFPSFILKCHNLTYLDISQNGWNGTIPESLYSNLGKLEYLNLTNCGFEGKLSPNMSMLSNLKELRIGQLTELWHLDLGKNYFNSTIPSELGLCTNLSFLSLAVNDLTGPLPLSLASLSRISELGISDNSFSGELSPSLISNWTQLISLQLQNNNFTGKVPTHIGLLKKINFLYLYSNQFSGPIPVEIGNLKEMTELDLSQNQFSGPLPSTLWSLTNIQVMNLFFNQLSGTIPTDIGNLTSLQIFDVNNNNLYGELPETIAQLTALSNFSVFSNNFTGSIPREFGKSNPSLAHVYLSNNSFSGELPPDICSGGNLTILAVNNNSFSGPLPKSLRNCSSLTRVRLDDNQLTGNITDAFGVLPILIFISLTRNQLVGELSPEWGECANLTSMDMGSNKLSGKIPSALSKLSQLRYLSLHSNDFTGSIPPEVGNLSLLFTFNLSSNHLSGEIPKSYGRLAQLNFLDLSNNNFSGSIPKELGDCDRLLSLNLSHNSLSGEIPNELGKLFSLQIMLDISSNSLSGPLPQNLGKLTTLEILNVSHNHLSGTIPQSFSTMLSLQSVDFSYNKLSGSIPTGRVFQTATAEAYAGNSGLCGDIKGLTCPKSFSPDKSGGVKNKVLLGVIIPVCALFMVIISVGVILGRRHDKKHLDEESKRVEKSDQPISVVWGRDGKFTFSDLVKATDDFNDKYCIGKGGFGSVYRAQLLTGQVVAVKRLNVSDSEDIPAMKRQSFLNEIKSLTGVRHRNIIKLYGFCSCRGQMFLVYEYVDRGSLAKVLYREEENMELMWGTRLKIVQGIAHAISYLHTDCSPPILHRDVTLNNILLDSDLEPRLADFGTAKLLSSDTSTWTSVAGSYGYMAPELAQTMRVTEKCDVYSFGVVVMEIMMGKHPGELLSTLSSKNYLSSMEEEPQVELKEVLDQRLPPPTGQLAEAVVFTMTIALACTHAAPESRPIMRAVAQELSATTQAYLSQPFGIITMNKLRGLPK* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1698 1192 Pfam Leucine Rich Repeat 693 714 IPR001611 GO:0005515
Pvu1g1698 1192 Pfam Leucine Rich Repeat 742 761 IPR001611 GO:0005515
Pvu1g1698 1192 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Pvu1g1698 1192 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 124 - -
Pvu1g1698 1192 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 124 1186 - -
Pvu1g1698 1192 Gene3D Ribonuclease Inhibitor 483 811 IPR032675 -
Pvu1g1698 1192 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 6 124 - -
Pvu1g1698 1192 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 124 1186 - -
Pvu1g1698 1192 Pfam Protein kinase domain 894 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1698 1192 Pfam Leucine rich repeat 577 631 IPR001611 GO:0005515
Pvu1g1698 1192 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Pvu1g1698 1192 Gene3D Transferase(Phosphotransferase) domain 1 973 1178 - -
Pvu1g1698 1192 Gene3D Ribonuclease Inhibitor 350 470 IPR032675 -
Pvu1g1698 1192 SUPERFAMILY RNI-like 277 584 - -
Pvu1g1698 1192 SUPERFAMILY L domain-like 46 368 - -
Pvu1g1698 1192 CDD STKc_IRAK 898 1167 - -
Pvu1g1698 1192 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1018 1030 IPR008266 GO:0004672|GO:0006468
Pvu1g1698 1192 SMART LRR_typ_2 122 146 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 618 642 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 401 425 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 280 304 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 449 473 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 739 762 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 666 690 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 98 121 IPR003591 -
Pvu1g1698 1192 SMART LRR_typ_2 499 522 IPR003591 -
Pvu1g1698 1192 SUPERFAMILY Protein kinase-like (PK-like) 872 1167 IPR011009 -
Pvu1g1698 1192 SUPERFAMILY L domain-like 498 788 - -
Pvu1g1698 1192 ProSitePatterns Protein kinases ATP-binding region signature. 898 920 IPR017441 GO:0005524
Pvu1g1698 1192 Gene3D Phosphorylase Kinase; domain 1 853 972 - -
Pvu1g1698 1192 Gene3D Ribonuclease Inhibitor 276 349 IPR032675 -
Pvu1g1698 1192 ProSiteProfiles Protein kinase domain profile. 892 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1698 1192 Gene3D Ribonuclease Inhibitor 191 275 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1698 Pvu-Chr1 42472425 42476637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1698 25 660 Receptor kinase-like Gene Family AT4G08850 32.412 6.83e-76 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu1g1698 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1698 - - pvu:PHAVU_001G163700g 2074.29