Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1697 ATGCCAAATGCTAGCATGACAATTTTTCAAAAGGTTCATACTCTAGTTCTTCTTATTCTCTTTCTATGTCTGCTTCCATTGAAAATTGCTTCATCATCAAGAGCAGAAGCAGAAGCCCTTGTCAAATGGAAAAACACTCTATCCCCACCTCTTCCTCCTTCTCTAAATTCATGGTCCCTCACCAACCTTCCCAACCTTTGCATTTGGGATGCCATTGTTTGTGACAACACCAACACAACAGTCTCAGAGATAAACTTGTCTGGTGCCAATCTCAATGGGACTATCACTGTCTTGGATTTTGCTTCCCTCCCTAACCTCACCCAAATCAACCTCCATTCCAACCGGTTTGGTGGGTCAATACCTTCAGCAATTGGAAACCTCTCCAAGCTCACACTGTTGGACTTGGGGAACAACTCACTTGAAAACACACTGCCTCATGAACTAGGGCAGCTAAGGGAGCTTCAATATCTCAGTCTTTTCAACAACAGTCTCAGTGGCATCATTCCTTATCAGCTCATGAATCTCCCTAAGGTATGGTACATGGACCTTGGATCAAATTACTTTATAACTCCTCCTGACTGGTCCCCATATTCATGCTTGCCTTCCTTGACACGCCTTGCCTTACATCTAAATCCATCATTGACTGGTGAATTCCCAAGTTTCATACTCAAGTGCCATCACTTGACATACCTTGACATCTCTTGGAATGGATGGAATGGCACTATACCAGAATCCTTGTATAGCAATTTGGGCAAGCTAGAATACCTCAACCTCACCAACTGTCGGTTTGAAGGAAAACTATCACCCAACTTGTCCATGCTTTCTAATCTCAAAGAACTTCGCCTAGGTAATAACATGTTTAAGGGTCCTGTTCCCACTGAGATAGGATTGATATCTGGGCTTCAAATTCTTGAACTGCGTGACATTTCTGCCCATGGAAAAATTCCTTCTTCCATAGGCCAACTCAGGGAGCTAAGGCATCTTGATCTTAGTAAAAATTATTTTAACTCTACAATCCCTTCTGAGCTTGGCCTATGCACAAATTTATCCTTCTTGAGTTTAGCTTTGAATGATTTGACTGGTCCTCTGCCCTTGTCATTAGCTAGTCTGTCTAGAATATCAGAATTGGGGATATCAGAAAATTCCTTTTCTGGTGAACTTTCTGCTTCACTCATCTCTAACTGGACCCAGTTGATCTCCTTGCAAATCCAAAACAATAACTTTACAGGAAAGGTTCCTACACATATTGGCCTGTTGGAAAAAATTAACATCCTCTATCTGTACAAAAATCACTTCTCTGGTCCCATTCCTGGAGAGATTGGAAACCTGAAAGAAATGACACAGTTAGACCTTTCACAAAACCAATTCTCTGGTCCAATTCCATCAACTCTTTGGAATCTGACAAACATTGAAGTCATGAATCTTTTCTTCAATCAGCTCTCTGGAACCATTCCCACGGATATTGGAAACTTGACCTCACTGCAAATCTTTGATGTCAACACCAATAACTTGTATGGGGAGTTGCCAGAAACCATTACTCAACTAACAGCTTTAAGAAATTTTTCTGTGTTCAGCAATAACTTCACTGGCAGCATTCCTAGAGAATTTGGAAAGAGAAATCCTTTTTTGACTGATGTCTACCTTACAAACAACAGCTTTTCCGGAGAACTGCCAGGCGACTTGTGCAGTGATGGCCAGCTAAATATTTTGGCAGCCAATGAGAACAGTTTTTCAGGGCCATTGCCAAAGTCCTTGAGAAATTGTTCATCACTTGTTAGAGTTCGGCTTGATAATAACCAGCTCACTGGAAATATCACAGACGCATTTGGCGTTCTACCAAATCTTGTTTTTATCTCACTTACTAAAAATCAACTTGTTGGTGAGCTCTCTCCGGATTGGGGTGAGTGTGGCAACTTAACCAATATGGATATGGGAAGCAACAAACTTTCTGGAAAAATTCCTTCTGCGCTAAGTAAGTTGAGTCAATTAAGGTATCTAAGCCTTCATTCCAATGATTTCTCTGGTAGTATCCCACCTGAAGTCGGAAATCTAAGCCTGCTTTTAAAGTTCAATCTGAGCAGTAACCATTTATCGGGAGAAATCCCAATGAGTTACGGGAGATTGGCTCAGCTAAATTTTCTTGATTTATCAAATAACAGCTTCATTGGAAGCATTCCTAAAGAGCTTGGTGATTGTGATCGCTTACTGAGCCTGAATTTAAGTCATAACAGTCTATCTGGGGAGATACCAAATGAACTTGGCAATCTGTTCTCTCTGCAAATCATGTTGGACATCAGCAGCAACTCTCTTTCTGGGCCTCTTCCCCAAAACCTTGGAAAGTTAACAACATTGGAGATTCTCAATGTGTCACACAACCATCTATCAGGGACAATCCCACAATCTTTTTCAACCATGCTCAGCCTTCAATCTGTTGATTTTTCTTACAACAAATTGAGTGGTTCAATCCCCACTGGTCGTGTTTTCCAGACAGCCACTGCTGAAGCCTATGCTGGGAACTCAGGTTTGTGTGGTGACATAAAAGGATTAACTTGCCCCAAATCACTTTCCCCAAACAAATCCGGAGGAGTAAACAAAAAGGTTCTTCTTGGTGTTATCATACCAGTTTGTGCCTTACTTATTGGGATAATTAGTGTTGGAGTAATACTTGGTCGGCGGCATGACAAAAAACACCTTGATGAAGAGTCCAAAATAGTTGAAAAAAGTGATCAGCCTATTAGCGTGGTGTGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACCGATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTATAGAGCACAATTACTCACAGGTCAAGTTGTTGCTGTGAAGAGGCTCAACATATCAGACTCTGATGACATTCCAGCAATGAAGCGCCAGAGCTTTTTGAATGAGATAGAATCACTTACAGGAGTGAGGCACCGCAATATAATAAAGCTTTATGGGTTCTGTTCTTGCAGGGGACAAATGTTCTTGGTTTATGAATATGTAGACAGAGGAAGTTTGGCAAAAGTGTTGTATACAGAGGAAGGAAAATCGGAGCTAAGGTGGGGCACAAGGCTAAAAATTGTGCAAGGAATAGCACATGCAATTTCATACTTGCACACTGACTGCTCCCCACCAATCGTGCACCGGGATGTAACACTGAATAACATATTACTAGACTCCGACTTAGAACCTCGTCTTGCAGATTTTGGCACAGCAAAACTGCTAAGCTCAGACACTTCAACTTGGACCTCAGTTGCTGGATCCTATGGTTACATGGCTCCAGAGCTAGCACAAACTATGAGAGTGACTGAGAAGTGCGACGTGTATAGTTTTGGGGTGGTGGTGATGGAGATATTGATGGGAAAGCATCCTGGAGAATTCTTGAGTACACTGTCTTCAAAGAAGTATTTGTCATCAACGGAGGAAGAAGCACAGGTGGTATTGAAGGAGGTGCTAGACCAAAGGCTTCCACCTCCAACAGGCCAATTAGCAGAAGAAGTAGTGTTCACAATGACCATAGCTTTGGCATGCACACGTGCGGCTCCAGAGTCCAGACCCATCATGCGTGCTGTGGCACAAGAACTATCGGCTACTACTCATGCTTCTCTTCCCCTGCCATTTGGCATCATAACCATGAACAAGCTTTCAATGCAGGGCTCCACAAATAGTGTGTCATAA 3720 0.4215 MPNASMTIFQKVHTLVLLILFLCLLPLKIASSSRAEAEALVKWKNTLSPPLPPSLNSWSLTNLPNLCIWDAIVCDNTNTTVSEINLSGANLNGTITVLDFASLPNLTQINLHSNRFGGSIPSAIGNLSKLTLLDLGNNSLENTLPHELGQLRELQYLSLFNNSLSGIIPYQLMNLPKVWYMDLGSNYFITPPDWSPYSCLPSLTRLALHLNPSLTGEFPSFILKCHHLTYLDISWNGWNGTIPESLYSNLGKLEYLNLTNCRFEGKLSPNLSMLSNLKELRLGNNMFKGPVPTEIGLISGLQILELRDISAHGKIPSSIGQLRELRHLDLSKNYFNSTIPSELGLCTNLSFLSLALNDLTGPLPLSLASLSRISELGISENSFSGELSASLISNWTQLISLQIQNNNFTGKVPTHIGLLEKINILYLYKNHFSGPIPGEIGNLKEMTQLDLSQNQFSGPIPSTLWNLTNIEVMNLFFNQLSGTIPTDIGNLTSLQIFDVNTNNLYGELPETITQLTALRNFSVFSNNFTGSIPREFGKRNPFLTDVYLTNNSFSGELPGDLCSDGQLNILAANENSFSGPLPKSLRNCSSLVRVRLDNNQLTGNITDAFGVLPNLVFISLTKNQLVGELSPDWGECGNLTNMDMGSNKLSGKIPSALSKLSQLRYLSLHSNDFSGSIPPEVGNLSLLLKFNLSSNHLSGEIPMSYGRLAQLNFLDLSNNSFIGSIPKELGDCDRLLSLNLSHNSLSGEIPNELGNLFSLQIMLDISSNSLSGPLPQNLGKLTTLEILNVSHNHLSGTIPQSFSTMLSLQSVDFSYNKLSGSIPTGRVFQTATAEAYAGNSGLCGDIKGLTCPKSLSPNKSGGVNKKVLLGVIIPVCALLIGIISVGVILGRRHDKKHLDEESKIVEKSDQPISVVWGRDGKFTFSDLVKATDDFNDKYCIGKGGFGSVYRAQLLTGQVVAVKRLNISDSDDIPAMKRQSFLNEIESLTGVRHRNIIKLYGFCSCRGQMFLVYEYVDRGSLAKVLYTEEGKSELRWGTRLKIVQGIAHAISYLHTDCSPPIVHRDVTLNNILLDSDLEPRLADFGTAKLLSSDTSTWTSVAGSYGYMAPELAQTMRVTEKCDVYSFGVVVMEILMGKHPGEFLSTLSSKKYLSSTEEEAQVVLKEVLDQRLPPPTGQLAEEVVFTMTIALACTRAAPESRPIMRAVAQELSATTHASLPLPFGIITMNKLSMQGSTNSVS* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1697 1239 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Pvu1g1697 1239 SUPERFAMILY L domain-like 543 830 - -
Pvu1g1697 1239 SMART LRR_typ_2 127 151 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 322 346 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 274 300 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 443 467 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 708 732 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 491 515 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 103 126 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 660 684 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 781 804 IPR003591 -
Pvu1g1697 1239 SMART LRR_typ_2 612 636 IPR003591 -
Pvu1g1697 1239 Gene3D Phosphorylase Kinase; domain 1 895 1014 - -
Pvu1g1697 1239 ProSiteProfiles Protein kinase domain profile. 934 1217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1697 1239 SUPERFAMILY RNI-like 292 624 - -
Pvu1g1697 1239 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1060 1072 IPR008266 GO:0004672|GO:0006468
Pvu1g1697 1239 SUPERFAMILY L domain-like 51 385 - -
Pvu1g1697 1239 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Pvu1g1697 1239 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 129 - -
Pvu1g1697 1239 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 129 1228 - -
Pvu1g1697 1239 Gene3D Ribonuclease Inhibitor 193 511 IPR032675 -
Pvu1g1697 1239 CDD STKc_IRAK 940 1209 - -
Pvu1g1697 1239 ProSitePatterns Protein kinases ATP-binding region signature. 940 962 IPR017441 GO:0005524
Pvu1g1697 1239 Pfam Protein kinase domain 936 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1697 1239 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 9 129 - -
Pvu1g1697 1239 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 129 1228 - -
Pvu1g1697 1239 SUPERFAMILY Protein kinase-like (PK-like) 915 1209 IPR011009 -
Pvu1g1697 1239 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Pvu1g1697 1239 Gene3D Transferase(Phosphotransferase) domain 1 1015 1217 - -
Pvu1g1697 1239 Pfam Leucine Rich Repeat 252 272 IPR001611 GO:0005515
Pvu1g1697 1239 Pfam Leucine Rich Repeat 784 803 IPR001611 GO:0005515
Pvu1g1697 1239 Gene3D Ribonuclease Inhibitor 525 853 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1697 Pvu-Chr1 42461261 42465389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1697 16 678 Receptor kinase-like Gene Family AT4G08850 32.331 7.20e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu1g1697 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1697 - - pvu:PHAVU_001G163700g 2406.71