Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1663 ATGGAGGGAGGGAGAGGAGTTGCGAATGGAAACGCTTCAAACGCAGAGGTTATCAGGTACAGAGGGATTCGTAGGAGGCCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGTGCTCGAATATGGCTTGGAACATTTGACACTGCTGAACAAGCTGCACGTGCTTACGATGCTGCTGCTTTTTATTTTCGGGGTCACAAGGCCATACTCAACTTCCCTAATGAGTATGGTCACACCACTCCTAATAATCCTATCTCGTTTTCAAATTCACTGCCTCTTCATTCTTCTTCTTCTTCTTCTTTTCCTTCTTACTCTAGTGGCGAGGGTTCGTCACAACAACAGCGAAATGGTGATGTAACTTTCGAATTGGAATACTTGGACAATAAGTTGTTGGAAGAACTCCTTCAGGCGCCTGATGGTTCAGGCAACGACTCCAATTAA 453 0.4547 MEGGRGVANGNASNAEVIRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFYFRGHKAILNFPNEYGHTTPNNPISFSNSLPLHSSSSSSFPSYSSGEGSSQQQRNGDVTFELEYLDNKLLEELLQAPDGSGNDSN* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1663 150 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Pvu1g1663 150 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Pvu1g1663 150 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Pvu1g1663 150 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Pvu1g1663 150 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Pvu1g1663 150 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Pvu1g1663 150 MobiDBLite consensus disorder prediction 77 123 - -
Pvu1g1663 150 PANTHER DNA-BINDING DOMAIN 15 140 IPR044808 GO:0003700|GO:0009873
Pvu1g1663 150 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Pvu1g1663 150 PANTHER - 15 140 - -
Pvu1g1663 150 MobiDBLite consensus disorder prediction 79 123 - -
Pvu1g1663 150 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1663 Pvu-Chr1 42010504 42011278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1663 19 141 AP2-EREBP Transcription Factor Family AT3G23230 61.789 4.17e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu1g1663 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1663 - - vun:114173094 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1663 1 42010504 42011278 Pvu1g1663 1 42010504 42011278 ECH
Pvu1g1663 1 42010504 42011278 Pvu7g1990 7 43136157 43136600 PCT