Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1655 ATGGGTACTAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCGTACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCGGAATATCGTGGAGCAGATTGGTTGTGGGAAATTTTCGCACAACGCATTAGGCTTAGCAGTGGCTAAGATGTCGTATCATGCATATTCCTTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTTGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTGTTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTGTTCAGCTTGGTTCTCTTAATAAAGTGATTGAAGATACGGGGTTTGTAACTCATATTAGAAATCTCTTTTTGTCTACTCAAAATTACTCAATAGCCCAATGTCCCAGTCAAATGCAGGGCAGTTTGAAGAGTTCTTTATCTCAGCTGGATATATTAAAGGAAAATTTGTCTTCAGATGTTATGCCAACTGGCTTTTACAATTCACAGAAATCTATGAAGAGTGAAACATCAGATGTTTTAATGCCCCTTCAATGTTCTGGGAGGAACGATGCACCTCATTCTGCTTGTGTGAAAATGTCTGATGACGTGGCCAAGCAAGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCAAGATTTTGAAGAGATGAAACCTCTCTATGGGAGGAAGGGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTTGTCATTTTTAAGTGACTTTGTTACAGATAATGATTTAATATGTCCATCAGAAAAAGTCAAAATTGATTCTGCATACTTTCCTTCAGCTTTTCTTGATACTGTTGTTTGTGAAACTGATAAGTTGCATTACCAAAAAGGGGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCGCAACATGTTGAAAAGTCAAAGTTTTGTTCTGAGCCTTCTTACAAGGATATGTCACATGTGTTAAATTTCCCTGTTGGCTGTGAGCTGCATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAATGTTTTGATTGGCCAGCACAGGTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGCCATAGTAATAATGATGTTAATAGTGAATTATCGTTTTGTCCATCAATGCAATCTGCAATGGCATCTGGAAAAAACCATGAAGCTTCTACTCACAATGTGTATGCTATTAATTCAGAAGGTTGTTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTTTGAGTTCATCATCAGGAATATGTGGTGTGATGTCCTCCAAAGCTGTTTCATCTACGTTCCCTAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAAAGGGCCAGGCCTGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGTGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAGCTGACTTTGGTGATACAAAGTCTAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAAGTAGGGGGCCATCTGAAAGTTCATTCGGTATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTGGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAGGGTGGTACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTGGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCAAGGTGCATTCACAATAA 2202 0.411 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCRNIVEQIGCGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTVAVVAVAPLGVVQLGSLNKVIEDTGFVTHIRNLFLSTQNYSIAQCPSQMQGSLKSSLSQLDILKENLSSDVMPTGFYNSQKSMKSETSDVLMPLQCSGRNDAPHSACVKMSDDVAKQEGPELYSDESSILLQSISNMMNVEHQDFEEMKPLYGRKGEEGSSGCKDVRLESENNVLSFLSDFVTDNDLICPSEKVKIDSAYFPSAFLDTVVCETDKLHYQKGVLNFTQPSDANSQHVEKSKFCSEPSYKDMSHVLNFPVGCELHEALGPSFLKGSKCFDWPAQVNQDMKTVEMSDEISQLTSESRPEHLLEAMVANICHSNNDVNSELSFCPSMQSAMASGKNHEASTHNVYAINSEGCSIDQFSLVKEDKHHSLSSSSGICGVMSSKAVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLADFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSVLVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSKVHSQ* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1655 733 MobiDBLite consensus disorder prediction 538 560 - -
Pvu1g1655 733 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 547 596 IPR011598 GO:0046983
Pvu1g1655 733 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 560 601 IPR036638 GO:0046983
Pvu1g1655 733 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Pvu1g1655 733 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 733 IPR043561 GO:0003700|GO:0006355
Pvu1g1655 733 MobiDBLite consensus disorder prediction 524 560 - -
Pvu1g1655 733 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1655 Pvu-Chr1 41914432 41922095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1655 1 728 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.351 2.24e-152 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1655 - - gmx:100798490 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1655 1 41914432 41922095 Pvu1g1655 1 41914432 41922095 ECH
Pvu1g1655 1 41914432 41922095 Pvu7g2003 7 43284033 43290243 PCT