Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1653 ATGGTGATAAGTGATTATGATTTGCACAAGGTTGAAGAGACCCAGAAACAGCCCAAAATCCTAAAAGACCACAAACCCCCCAACCAAAAGGCCAACATGACTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAGTGTGTGAGAGGTTGTGTTTTTGCTCCTTACTTTTGCCATGAACAGGGTGCCACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCTGTGAGTGACCGTTGTGAAGCTGCTGTCACTATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGCTGTGTTGCTCATATTTTTTCACTCCAACAACAGGTGGTGAATTTACAAGCACAACTAGTTCATCTCAAGGAACAGGCAGGTCAGATCTATCTCAATGCCTCTGCCACTGAAACCCCTAATGAGAAATACTTAGGAAAATCTACCAATTTTCCCCAATATCTTGAGAGTTGGTTCCAGACGGAGAATTCCAACTCGGCTTCACAATTTCTTCCTAAATTGTCCACCAATACTTCAACACAGTATTATGGAAATACTAATACCTTTATGGACCCAAACCCTATTGGAAATGATGATGACAATTCCGTAACAGTAGCGGAAAGCATCTCCTTTTCTAGCTTTGAAGAGAGTTGTAACTCCATGTCCTGTGACATGCAAAGGCAGTGGACCTTTTATCAAGTGGATAACCTTCAGTAA 750 0.424 MVISDYDLHKVEETQKQPKILKDHKPPNQKANMTGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFSLQQQVVNLQAQLVHLKEQAGQIYLNASATETPNEKYLGKSTNFPQYLESWFQTENSNSASQFLPKLSTNTSTQYYGNTNTFMDPNPIGNDDDNSVTVAESISFSSFEESCNSMSCDMQRQWTFYQVDNLQ* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1653 249 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 33 239 - -
Pvu1g1653 249 PANTHER LOB DOMAIN CONTAINING PROTEIN 33 239 - -
Pvu1g1653 249 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Pvu1g1653 249 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Pvu1g1653 249 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1653 Pvu-Chr1 41858110 41859150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1653 37 163 AS2 family AT3G58190 75.969 2.05e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu1g1653 LOB 8.8e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1653 1 41858110 41859150 Pvu1g1653 1 41858110 41859150 ECH
Pvu1g1653 1 41858110 41859150 Pvu7g2007 7 43334104 43335221 PCT