Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1632 ATGGCTCTTTCTTCCTCTATGCTCCAACTTCAACCCTCTTCACTAAAGAAGAAAACTGCAGTTTCCAGAAATTGGATTCTGCTGGACCACCATGGCAAACCCACTGTGCTGGATGCAGACAAGCATGCTATCATGCGTCTGGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCGTATCCCTCCACCATTTTGGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATTATCACTGCAGATGAGGTGTTGCTAAGAGACCCAACGGATGATGACGTTGTGCCAATAGTTGAAGAGCTTCGACGACGGTTACCCAAAGTAAGTGCTTCTGGGGAAGGCCAAGGAGAAGAAGAGGCGTGTGTTCAAGATGGGGAGGGTGGAGATGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCCATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACATCTAAGATTAGCAGTCGTAACTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGTTGACAAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACTGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCAAAGTGGCTTTATGGTTCTCCAAATAAAGGTTCCAAAATACACAAATCAAGCAGAGCAAGTGGAACCACAGTTCACAGGGAGGATGGTGTAGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAGTTGGCCACATTGCGAGAATATATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATTAGTGCCGGGACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAAGTACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGCCTTGTTGGGTCTTGA 1167 0.4336 MALSSSMLQLQPSSLKKKTAVSRNWILLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGEGQGEEEACVQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNKGSKIHKSSRASGTTVHREDGVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKVPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1632 388 Gene3D Magnesium transport protein CorA, transmembrane region 104 317 - -
Pvu1g1632 388 MobiDBLite consensus disorder prediction 227 243 - -
Pvu1g1632 388 MobiDBLite consensus disorder prediction 115 134 - -
Pvu1g1632 388 CDD Mrs2_Mfm1p-like 25 385 IPR039204 -
Pvu1g1632 388 Pfam CorA-like Mg2+ transporter protein 277 375 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pvu1g1632 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 388 IPR039204 -
Pvu1g1632 388 Coils Coil 188 215 - -
Pvu1g1632 388 Gene3D - 7 96 - -
Pvu1g1632 388 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 11 388 - -
Pvu1g1632 388 MobiDBLite consensus disorder prediction 227 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1632 Pvu-Chr1 41538383 41542319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1632 1 361 MRS2 Gene Family AT5G64560 70.190 2.20e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1632 K16075 - gmx:100799368 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1632 1 41538383 41542319 Pvu1g1632 1 41538383 41542319 ECH