Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1613 ATGGGTCTGGAAAAGAATGTTCGTGTATTTTTCGATGTCTCAATTGATGCCGACCCCGTGGAAAGAATTGTTATCCAGCTTTTTGATAGTATTGTTCCAAAGACAGCCGAGAATTTTCGGGCGCTCTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGGAAACCTTTGCATTATAAGGGAACAAGCTTTCATCGCATAATTAAAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACGGGTGGGGAAAGTATATATGGTGGAAAATTTGCAGATGAAAATTTCAAACTAAGACATGATGGACCTGGCTTTCTTTCTATGGCTAATAGTGGGCCTAACACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATGGATGCTCTGAAGAAAATTGAGCTGGTAGGAACATCCGATGGGAAACCTACCCAGACAGTTAAAATTATTGATTGTGGTGAAGTTTTTGAAACAAAAGCTCAGCATACGGTTGAGAAGGAGAAAGGGAAAAGGAGAAAATCAGGGAAACCCCTTAATTCTGATGATAGTTCTGAGTCTTCCGACAAAAAGTCAAGGGGGAAAAGAAAAAAATCTTCCAAAGACACGAAGACAAAAAGGAGAAGATACTCAACATCTGATAGTGATAGTTATTCCTCAGATTCTGAATCAGATTCAGCTTCAGATTCTGAATCGGATTCTTCTGATTCTGATTCCTCTAGTTATGGGAAACACCAGAAGAGGAGAAATAAGCGCAAGCATGGGAAGAAGAGGAAAATTGGTCGAAACCAGAGAAAGAGAAGTAGGCACAGTCGAAGTAGAAGATCAAAGCACAAGTCTAGGCGCAGTTCTGAGGATTCAAGTGATAGCTCTAGTACTAGTGGTAGTAGTTCTAGCGATGAGAAAGCTGATCGTCGCTCCTCAGGTCGGAAAACACATGCTGACAATAAAGCAGAAAGAAATCAAGACACAGAAAAGCAATCTTCGAGCCTTCCTCGACAAGATCAAATTATTCCAGAGCAAACAACGGATACCAAGATTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCGGAAAATGGGGCATTTGTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAACAACATGCTAATTCAGATGTTTCAAATGACAATAGAAGTGCAAGAACTGGGAGAAGTCCTACCAGGGATTCTGGTGAGCTAGAGCTAAACCAAGGACGTGCTTTGTTGCAGGCTAGTTTTGGTCAAAAAGCATCTGAACCTGCAGCCCCTAAACATGGTCATCGCTTTTCAAAAAGCCCTTCACCAAATGGCATGCCTAAGCGTATTAAAAAAGGACGTGGTTTTACTGAGCGCTATGCCTTTGCCCGCAGATATCGTACTCCATCTCCTGAGCGGTCTACTCGCACATACCGATATGGTGATAGAAATATAAGGAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGAGCGATCTCCACCACGACGTTATCGAAGTCCCCCTGGGGGTAGAAATCGTCCAAGATACCAAAGCAGGAGAAGTCTTAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCGTGACCGGAGTCGAAGCCCAAGACGTAGTCTTAGTCCTGAAGACAGGCGACCTCCCATAAGTGACAGGTTAAAATCTCGACTTGGTCCAAGAAGTGATGAACGATTGGCAGACAGGAGGGGTAGGTCAAAGTCCAATTCTAGGAGCAATGGCTCTTCTCGCTCCAGATCCCCTGATGCTACACCACCAAAACGACATGATAAAAGGACTTCCGTATCTCGTAGCAGGTCTAGGTCCAGCTCTTCATCCGGTCAGAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGGTTAGGTAA 1992 0.4347 MGLEKNVRVFFDVSIDADPVERIVIQLFDSIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLRHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDALKKIELVGTSDGKPTQTVKIIDCGEVFETKAQHTVEKEKGKRRKSGKPLNSDDSSESSDKKSRGKRKKSSKDTKTKRRRYSTSDSDSYSSDSESDSASDSESDSSDSDSSSYGKHQKRRNKRKHGKKRKIGRNQRKRSRHSRSRRSKHKSRRSSEDSSDSSSTSGSSSSDEKADRRSSGRKTHADNKAERNQDTEKQSSSLPRQDQIIPEQTTDTKIRRTVDKQSHEEGELSPENGAFVNNGHDTQAEFSKPAKQHANSDVSNDNRSARTGRSPTRDSGELELNQGRALLQASFGQKASEPAAPKHGHRFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSTRTYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYQSRRSLSRSISRSPVRGRFRDRDRSRSPRRSLSPEDRRPPISDRLKSRLGPRSDERLADRRGRSKSNSRSNGSSRSRSPDATPPKRHDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGVR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1613 663 CDD cyclophilin_ABH_like 8 173 - -
Pvu1g1613 663 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Pvu1g1613 663 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 MobiDBLite consensus disorder prediction 473 516 - -
Pvu1g1613 663 SUPERFAMILY Cyclophilin-like 6 175 IPR029000 -
Pvu1g1613 663 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pvu1g1613 663 MobiDBLite consensus disorder prediction 637 651 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 182 663 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 364 379 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 555 607 - -
Pvu1g1613 663 Gene3D - 2 182 IPR029000 -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 264 298 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 182 212 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 387 418 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 346 363 - -
Pvu1g1613 663 MobiDBLite consensus disorder prediction 318 345 - -
Pvu1g1613 663 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 402 - -
Pvu1g1613 663 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1613 Pvu-Chr1 41303946 41310644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1613 25 171 U-box Gene Family AT5G67530 48.322 4.12e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1613 K09566 - gmx:100791082 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1613 1 41303946 41310644 Pvu1g1613 1 41303946 41310644 ECH