Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1600 ATGGGTAACGCAGACTATGAATACCCGAACGCTGACTGCGTGCACCGAGTGGCAATTCCACCCCCTCAACCCTTCTTCAAGTCTCTCAAGTACTCCTTGAAAGAAACCTTTTTCCCAGATGACCCGTTTAGGAAGTTCAAGAACCAAACACCCTCTATCAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAGTGGGCACCCAAATACACCCTCCAATTCTTGAAATCAGACCTCATCTCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCCAGCTTTATACCGCCTTTGATTTATGCTATGATGGGAAGCTCAAGGGACTTGGCAGTGGGAACTGTGGCTGTTGGATCACTTCTGATGGCTTCCATGTTGGGTCGAGTGGTGAATTACATCGAGAATCCAAACCTTTATCTCCACCTAGCTTTCACTGCTACATTCTTTGCTGGAGTTTTGCAGGCATCTCTGGGCCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCAACAGTGGTTTGTCTGCAACAGCTAAAATCAATTCTTGGCCTTGAACATTTTACTCACGAGGCTGATCTAGTCTCAGTGATGCGTTCTGTTTTCAGTCAAACTCATGAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTTGTCACAAGATACTTTAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGGCGTCCGTCATACTGGGAAGTCTGCTGGTTTATCTCACACACGCTGAGAAGCATGGTGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGAATTTGGTGTTGGTGTCACCTTACATGGGCACTGCCATAAAAACTGGACTTGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTAGGTAGAAGCTTTTCAATGTTCAAAAATTATCATATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCCTTCACCTCTTGCTATCTCACCACAGGACCTTTTTCACGTTCAGCTGTGAACTATAACGCGGGGTGCAAGACTGCTGCATCGAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTAACACCTTTGTTCCATTTCACCCCCCTGGTGGTGTTATCGGCCATAATTGTGTCAGCAATGCTCGGGCTCATTGATTATCAGGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTAGTGTGCTTCAGTGCTTATGTTGGTGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGAGTACTTCTATTTATTGCAAGGCCAAGAACATTTCTCTTAGGCAACATTCCAAATTCTGCAGTATACAGAAATGTGGAACAGTATCCAAATGCAAATCATGTTCCTGGAATCCTGATTCTAGAAATTGATGCTCCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATGGATGAAGAGGAAGATAGGATAAAAGCTTCAGGGCAAACCAGTTTACAGTATGTTATAATGAATATGACTACTGTTGCAAACATTGATACTAGCGGAATAAGCATGCTTGAAGAATGCAAGAAAAGTGTTGACAGAAGAGGGTTACAACTTGTTTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTAGGGCATAAATGGGTGTATCTGACAGTTGAAGAAGCTGTTAGTGCATGCAATTTCATGCTCAACTCATACAAACCAAACCCCATGAAGGATGATTCAGAAGGTTGGAACAATGCCTAA 1962 0.4363 MGNADYEYPNADCVHRVAIPPPQPFFKSLKYSLKETFFPDDPFRKFKNQTPSIKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYIENPNLYLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLASVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVTNLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFSMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWMDEEEDRIKASGQTSLQYVIMNMTTVANIDTSGISMLEECKKSVDRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWVYLTVEEAVSACNFMLNSYKPNPMKDDSEGWNNA* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1600 653 PANTHER SULFATE TRANSPORTER 2 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu1g1600 653 SUPERFAMILY SpoIIaa-like 510 631 IPR036513 -
Pvu1g1600 653 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Pvu1g1600 653 Gene3D STAS domain 488 633 IPR036513 -
Pvu1g1600 653 TIGRFAM sulP: sulfate permease 64 627 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu1g1600 653 Pfam STAS domain 509 627 IPR002645 -
Pvu1g1600 653 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Pvu1g1600 653 Pfam Sulfate permease family 77 457 IPR011547 GO:0016021
Pvu1g1600 653 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Pvu1g1600 653 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1600 Pvu-Chr1 41080510 41087797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1600 10 641 Inorganic Solute Cotransporters AT4G02700 67.457 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1600 K17471 - gmx:100791091 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1600 1 41080510 41087797 Pvu1g1600 1 41080510 41087797 ECH
Pvu1g1600 1 41080510 41087797 Pvu7g1790 7 40808690 40816897 PCT