Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1580 ATGACGACGATACGCAGATTCTGTTGCAACGATCTTCTTCGCTTTTCCTCCGTCAATCTTGACCATCTCACCGAAACATTCAACATGTCCTTCTACATGACCTATCTTGCAAGATGGCCAGACTATTTTCATGTTGCTGAAGGTCCTGGAAATAAAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAGTCTTGGCATGGTCATGTAACTGCAGTAACAGTTGCTCCTGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTTATGAATCTGCTGGAAGAAATTAGTGACAACGTTGACAAGGCTTTCTTTGTTGATCTCTTTGTGAGAGCATCAAATGCGCCAGCCATCAAGATGTATGATAAGCTTGGCTATGTGGTTTATCGACGGGTGCTACGCTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCTTTGTCTCGTGATGTTGAAAAGAAGTCCATTATCCCTCTTAAAAGGCCAGTGACTCCTGATGAATTAGAGTATGATTAA 525 0.4286 MTTIRRFCCNDLLRFSSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNKIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEEISDNVDKAFFVDLFVRASNAPAIKMYDKLGYVVYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELEYD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1580 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Pvu1g1580 174 Gene3D - 2 162 - -
Pvu1g1580 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
Pvu1g1580 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016407
Pvu1g1580 174 CDD NAT_SF 43 97 - -
Pvu1g1580 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
Pvu1g1580 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu1g1580 Acetyltransf_1 3.2e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1580 K17972 - gmx:100306394 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1580 1 40807124 40819392 Pvu1g1580 1 40807124 40819392 ECH