Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1560 ATGGCTGCACCGCCAAATAGCAGGCTTCAAAGCATGTTAAGGGCTGCAGTGCAATCAGTTCAGTGGACTTACAGCCTCTTCTGGCAACTTTGTCCTCAACAAGGGATTTTGACGTGGGGTGATGGGTACTACAACGGAGCAATTAAGACTAGGAAGACAGTTCAAGCAATGGAAGTGAGCACTGAAGAAGCTTCTCTGCAAAGAAGCGAGCAACTTCGAGAGTTATATGAATCGTTGTCTGCTGGAGAAGCAAACGCTCAAACTCGAAGACCATGTGCTGCTTTGTCTCCTGAAGATCTAACGGAATCAGAATGGTTCTATTTGTTGTGTGTATCTTTCTCCTTTCTTCCTGGTGACGGGTTGCCCGGAACAGCATATGCCAGGAGGCAGCATTTATGGCTCACTGGTGCAAACGAAGTAGAAAGCAGAACATTTTCCAGAGCTATTCTTGCCAAGAGTGCTCATATTCAGACAGTGGTGTGCATTCCTGTGTTGGAGGGCGTGGTTGAGTTGGGCACAACTGAGAAGATGGAAGAAGACATAAATTTCATCCAACACATAAAGAGTTTCTTCATAGATGAGCAGCCTCCAACGGCAAAGCCTGCAGTGTCAGAGCATTCCACATCCAATCCCACTTCTTCTTCATACCCTGTTCTTGTCACTGCCACTACTGTCTCACCCAACCAAAAACACATCAACGTGGTTCATAAAGGAGAAGAAGAACCCAAGTTCAACTCTGAAGCAGGATTAGTAGTTCATAACACTTTCATACCCACCGAACTAATGGAGCTCGACACGTTGCAGGAGTTTAGGGTCGTGTCACCCGGAGATGGCTCCCACCACTTGGATTCCTTCCCCACAGAGGAATCCATGGCACTGTGTTCTGCAGGCTTGGAACTTCTTCATCTTCAACTACCACCACAACCTCCAG 931 0.4715 MAAPPNSRLQSMLRAAVQSVQWTYSLFWQLCPQQGILTWGDGYYNGAIKTRKTVQAMEVSTEEASLQRSEQLRELYESLSAGEANAQTRRPCAALSPEDLTESEWFYLLCVSFSFLPGDGLPGTAYARRQHLWLTGANEVESRTFSRAILAKSAHIQTVVCIPVLEGVVELGTTEKMEEDINFIQHIKSFFIDEQPPTAKPAVSEHSTSNPTSSSYPVLVTATTVSPNQKHINVVHKGEEEPKFNSEAGLVVHNTFIPTELMELDTLQEFRVVSPGDGSHHLDSFPTEESMALCSAGLELLHLQLPPQPP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1560 310 MobiDBLite consensus disorder prediction 201 216 - -
Pvu1g1560 310 PANTHER TRANSCRIPTION FACTOR TT8 4 216 - -
Pvu1g1560 310 MobiDBLite consensus disorder prediction 197 216 - -
Pvu1g1560 310 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1560 Pvu-Chr1 40413941 40420139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1560 1 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 67.308 1.06e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1560 - - pvu:PHAVU_001G1503001 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1560 1 40413941 40420139 Pvu1g1560 1 40413941 40420139 ECH
Pvu1g1560 1 40413941 40420139 Pvu7g1762 7 40383553 40387926 PCT