Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1551 ATGACGATGTCGAGAGTGATGTGTAGACCAACACAGCCTCTGAAAAACGTTCCTTCCAGTGGACAAAGCCAGATGATGAGGCCAAAAGAGAAGGTGGTGTTGGTGATGGGAGCAACAGGGAGCGGGAAAACGAGGTTGTCGGTGGACTTAGCAACATGTTTTCCCTCAGAAATCATAAACTCTGACAAAATGCAAGTGTACGAAGGGCTTGAGATTGTGACGAACAAGGCCACCAAAGAGGAGCAGCGGGGGATCCCACATCATCTGCTGGGGATACAGAACCCCGACACGGAGTTCACGGCCTCCGACTTCTGCGACGTCGCCTCACGCGCCATCGAGTCCATCACGCGCCGCGACAAGGTTCCGATAGTGGTGGGAGGATCCAACTCGTACATGGAGGCGCTGGTGGAGAGGTTCGGGCCGCGGTTCGAGTGGTGCTTTCTGTGGGTCGACGTGTCCGTGCCGGTGCTCCATTCCTACGTGGCGCAGCGCGTGGACCACATGCTCCGTTGCGGAATGGTGAACGAGTTGAGACCGTTTTTCAACGTCAACGGCGATTACGCTCGTGGGATAAGGAAGGCCATTGGGGTTTCCGAGTTCCACGCGTACTTCCGGCGGGAGGCGACGGCGAGCGGCGAGACGAGGATGCGGCTGCTGCAGGAGGCGGTGAGGGACGTGAAGAGGAACACGTGCCACTTGGCATGCAAGCAACTTGGGAGAATCCACATGCTCCGTAGTGTTGAGGGGTGGAAGATCCACCGCGTTTGCGCCACGCCTGTGTTTCAGAAACGTGGCCACGACGCCAATGAGGCTTGGAATAACATGGTGGCGCAACCCTGTGCCTCCATTGTTTCTCAGTTTCTCAGTTCTGCCAATTCCACTTCTGGGAGAGTCGCACCTTCTATGCAACCAAACTAA 918 0.5643 MTMSRVMCRPTQPLKNVPSSGQSQMMRPKEKVVLVMGATGSGKTRLSVDLATCFPSEIINSDKMQVYEGLEIVTNKATKEEQRGIPHHLLGIQNPDTEFTASDFCDVASRAIESITRRDKVPIVVGGSNSYMEALVERFGPRFEWCFLWVDVSVPVLHSYVAQRVDHMLRCGMVNELRPFFNVNGDYARGIRKAIGVSEFHAYFRREATASGETRMRLLQEAVRDVKRNTCHLACKQLGRIHMLRSVEGWKIHRVCATPVFQKRGHDANEAWNNMVAQPCASIVSQFLSSANSTSGRVAPSMQPN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1551 305 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 20 293 - -
Pvu1g1551 305 Pfam IPP transferase 65 141 - -
Pvu1g1551 305 Pfam IPP transferase 142 238 - -
Pvu1g1551 305 Gene3D - 29 288 IPR027417 -
Pvu1g1551 305 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 154 252 - -
Pvu1g1551 305 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 293 IPR039657 -
Pvu1g1551 305 MobiDBLite consensus disorder prediction 1 26 - -
Pvu1g1551 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 166 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1551 Pvu-Chr1 40282825 40283742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1551 142 297 C2H2 Transcription Factor Family AT2G27760 31.148 2.63e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1551 K10760 - gmx:100777757 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1551 1 40282825 40283742 Pvu1g1551 1 40282825 40283742 ECH
Pvu1g1551 1 40282825 40283742 Pvu7g1750 7 40285383 40286351 PCT