Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1526 ATGTCCCTTCCCTTTTATTTCTCCCTCTTTTTTATTTTTTCTTTTTCATTTATTCTTCCGCTTCCTTCTCTGGCCGCAAATGAGACCGTTCCCTGTCCCCTCAACATCACCGTGCTCCGCGTCGTGGGCGGCGGCGTCCGTCCCTCCTTCGACTCCGGCACGCAGTGCCATTACATCCTGCAGGCCCTCCACCTCCTCCAGGCGGACTACCTCCGTCGCAGCAACCTCTTCGTGCCGCCGCTCAACGCCTCCGAGTCCTGCTGGACCTCCTTCCAGTCCTTCATCAACGAATTCGATCCGAGCATCGATATCCGCTCCTCCTGCGGCCTCAAAACCGAGTGGATCTCCCAAGGCTGCATGAACATCACCACCAAACAGAAGTTCGAAGCCACCGTCCCCTCCGCCGCAATCCAGGCTGTCCAAGCCAACTGCAACCAGTCCCTCGAAAACAACGCCCCCTGCGCCCTCTGCACCACCAAACTCTCCAACCTTCTCTCCTACTTGACCGGCCCAACCGTCGGAAACGTCACCGATTGCCGAGCCTATACCACGATCTACGCCGCTTCTCTCTCTGACCAGTATGGTGTCACTGACCCAGGAAACGCCAAGTGTTTCTTCGGCCTCAATTTTTCCTCCTCCAGTTCCAGCAGCAAGCGCCGAACAATTGTTATCGTGGTTTCCGTTTTCTGTTTTGTGGCTTTGCTTGTTTTTGCTGGTGTTTGGACTTACCTTAGATTGAAGAGGAGGAACGAGTTTGCGGGAGAGAAGGGTGTTGGAACATCTGAACTTGGTTTGGGTTTGGGTTCTGGGTTGGATTCCATGAACCAGAGTACCACTTTGATTAGGTTCAGTTTTGATGAGATTAAAAAGGCTACTAGGAACTTCTCGAGGGATAACATGATCGGGAGTGGGGGTTATGGGAATGTTTATAAAGGGATGTTGCCAGATGGTAGTCCAGTTGCTTTTAAAAGGTTCAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCACGAAGTTGAGGTTATAGCGAGTGTTCGCCATGTGAATCTTGTTACCTTAAGAGGTTATTGTACTGCCACGACCAACTTAGAGGGGCACCAGAGGATTATTGTGACTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTTCTAAGAAAAATCTGACTTGGCCTATTCGTCAGAAGATTGCTCTCGGAACTGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATTCACAGGGATATTAAAGCTAGTAACATACTTCTGGACCATAAGTTTGAAGCCAAGGTGGCGGATTTCGGGTTGGCCAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGAGTGGCTGGGACTATGGGGTATGTTGCTCCTGAGTATGCCTTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCTCTTCAAACCAACGATGATGGGCAACCCTCTGCACTCACTGACTTAGCTTGGTCGTTGGTTAGAAACGGTAGTGCTTTGGATGTTGTTGAAGATGGCATTCCGGAGCCTGGTCCACCAGAAGTTCTCGAGAAGTACGTGTTGATTGCTGTCTTGTGTTCTCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGCTGGAGACAGATGAATCGGTTCCCTCCTTAATGGAAAGGCCAATTCCTTTTATTGCTGGGAGGATTGACATTGAGAAATCTGCGCTGAGTAACTCGGGTCAGCTCTGCAGTCCAACCGGTTATCAAGCATATACATTACAAGGTCGCCGCAGATCTATTTCTAAAGAAGAGGAAGAAGAAGAAGGAAGTTCAGTGGCTGATACTGTTACCACAGAATGA 1923 0.4878 MSLPFYFSLFFIFSFSFILPLPSLAANETVPCPLNITVLRVVGGGVRPSFDSGTQCHYILQALHLLQADYLRRSNLFVPPLNASESCWTSFQSFINEFDPSIDIRSSCGLKTEWISQGCMNITTKQKFEATVPSAAIQAVQANCNQSLENNAPCALCTTKLSNLLSYLTGPTVGNVTDCRAYTTIYAASLSDQYGVTDPGNAKCFFGLNFSSSSSSSKRRTIVIVVSVFCFVALLVFAGVWTYLRLKRRNEFAGEKGVGTSELGLGLGSGLDSMNQSTTLIRFSFDEIKKATRNFSRDNMIGSGGYGNVYKGMLPDGSPVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKNLTWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQTNDDGQPSALTDLAWSLVRNGSALDVVEDGIPEPGPPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRIDIEKSALSNSGQLCSPTGYQAYTLQGRRRSISKEEEEEEGSSVADTVTTE* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1526 640 Pfam SPARK 29 179 IPR043891 -
Pvu1g1526 640 ProSiteProfiles Protein kinase domain profile. 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1526 640 SMART serkin_6 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1526 640 PANTHER OS01G0253100 PROTEIN 30 622 IPR045271 GO:0004714|GO:0006468
Pvu1g1526 640 SUPERFAMILY Protein kinase-like (PK-like) 277 582 IPR011009 -
Pvu1g1526 640 CDD STKc_IRAK 301 570 - -
Pvu1g1526 640 Pfam Protein kinase domain 296 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1526 640 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pvu1g1526 640 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 30 622 - -
Pvu1g1526 640 Gene3D Transferase(Phosphotransferase) domain 1 376 579 - -
Pvu1g1526 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pvu1g1526 640 MobiDBLite consensus disorder prediction 615 640 - -
Pvu1g1526 640 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1526 Pvu-Chr1 39993378 39995665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1526 9 616 Receptor kinase-like Gene Family AT2G48010 59.869 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu1g1526 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1526 - - gmx:100786298 1058.13