Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1525 ATGGAGGACGAGGTGGATTCCCCTGTTGGTGTTCTTGAGGATTATTTTTTCAAGAGTTCAGAATCAGAAAGTAGTTCTTCCAAAGAACCTGGTACCACTACGGATTCTGATAAGTCAAAGCCCGGTTCTAGGTGGCATTCGTTTCTTCAATTGTTGAGGGTCAAATCGAAGAAGCCAGTAGCCACATTGTACCCTCTCAGTGTCCTCAAGCTCTCCAGAAGATTGAGCAGTGGCATGAGGGAGATTGTCATAGATGCAGATTCGTCCTTGCATAGGTCACCCTGGGAGATCTTCACTCACCATGAGATACAAATTGCAACCAATCACTTCGCCCAAGAAAATTGTATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATGGTCAGCTGGTGGCGATTAAACGATTAACACGTGGAGAAGAAAATGAAACTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCATCCCAATACTGCTAAATTAGTTGGCTATGGAGTTGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTAAAAAAGGGTGCTTAGCTTCAGTGTTGAATGGTTCCAAGGAGAAGCTACCATGGTCAGTTAGACAGAAAGTAGCATTAGGAACAGCCAAGGGTATATTGTATCTTCATGAAGGTTGTCAAAGAAGAATTATACACAGGGATATAAAAGCATCAAATATCTTGCTTACTGAGGACTTTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAACTGGACCCATCACACCGTCTCAAAAATTGAAGGGACTTTTGGTTACCTTGCTCCAGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATATTTTTGCCTTTGGTGTAGTGCTATTAGAATTAGTCACTGGGCGTAGAGCAATTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAGAACCTTTTCTGAAAAAGAATAATATTAGGGAGCTGATTGATCCTTCACTTGCTGGCGATTTTGACTGTCGGCAGATTAAAATTATGCTCTTGACAGCTTCTTTATGCATTCAACAATCCTCCATTCGTCGCCCCTCTATGAACCAGGCACGTCCTCTTGTTGTACATCTTCTGAATGGTAACTGCTCTAGGTTCACGAAGAAATCTCAACTTCCATTCTTTCGTAAAGACTTTCAGGAAGAGTTCATTGATTCTGATTAA 1224 0.4183 MEDEVDSPVGVLEDYFFKSSESESSSSKEPGTTTDSDKSKPGSRWHSFLQLLRVKSKKPVATLYPLSVLKLSRRLSSGMREIVIDADSSLHRSPWEIFTHHEIQIATNHFAQENCIGKGGYAEVYKGCLPNGQLVAIKRLTRGEENETIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSKKGCLASVLNGSKEKLPWSVRQKVALGTAKGILYLHEGCQRRIIHRDIKASNILLTEDFEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDIFAFGVVLLELVTGRRAIDYSQQSLVLWAEPFLKKNNIRELIDPSLAGDFDCRQIKIMLLTASLCIQQSSIRRPSMNQARPLVVHLLNGNCSRFTKKSQLPFFRKDFQEEFIDSD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1525 407 SUPERFAMILY Protein kinase-like (PK-like) 90 372 IPR011009 -
Pvu1g1525 407 MobiDBLite consensus disorder prediction 16 43 - -
Pvu1g1525 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pvu1g1525 407 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Pvu1g1525 407 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
Pvu1g1525 407 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 405 - -
Pvu1g1525 407 PANTHER OS08G0249100 PROTEIN 1 405 - -
Pvu1g1525 407 SMART serkin_6 110 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1525 407 Pfam Protein kinase domain 112 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1525 407 Gene3D Transferase(Phosphotransferase) domain 1 187 390 - -
Pvu1g1525 407 MobiDBLite consensus disorder prediction 18 32 - -
Pvu1g1525 407 ProSiteProfiles Protein kinase domain profile. 110 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1525 Pvu-Chr1 39982290 39985033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1525 98 381 Receptor kinase-like Gene Family AT1G53420 41.438 1.20e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu1g1525 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1525 - - gmx:100818913 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1525 1 39982290 39985033 Pvu7g1727 7 40033347 40036971 PCT