Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1520 ATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCGCTGAATACATGGGTGTTAATCTCGAATTTCAAGCTGTCTTATAAGCTTCTTAGACGTGACGATGGAACTTTCAATCGTGAGTTGGCGGAGTTTCTTGATAGAAAGGTCCCCGCCAATGCAATTCCTGTTGATGGGGTGTTTTCAATCGACCATGTCGATAGAAACGTTGGATTGTTTTACCGGGTGTATTTGCCATCCTCTGCGGACGAGGCTCAATGGGGTATCAAAGACCTCGAGAGGCCTTTGAGCACTACGGAAATTGTTCCTGTAATCATATTCTTTCACGGGGGAAGCTTCTCGCATTCCTCGGCAAATAGTGCTATCTACGATACCTTCTGCCGGCGCCTTGTGAGCATTTGCAAGGCTGCTGTGGTGTCTGTGAACTACCGGAGATCGCCGGAGCATCGGTATCCGTGCGCCTACGATGATGGCTGGGCAGCATTGGAGTGGGTGAAGTCAAGAACGTGGCTGCAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACTTGGCGGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTTGCGGTAAGGGCTGCGGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTTGGAGGAGAGAAGAGGACGGAATCAGAGTTGAGATTGGATGGGAAATACTTTGTGAGGTTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGAGAGAGTAGAGACCATCCTGCTTGCAACCCCTTTGGACCAAGGGGGAGAAGCCTTGCGGGACTCAGATTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAATCGGCATATGCAAAAGGTCTTGAGGATTCTGGACAAGAGGTCAAACTTCTTTATCTCCAGGATGCTACTATTGGCTTCTACTTCTTGCCAAACAATGAACATTTCTACTGCCTCATGAGGGAAATCAACAACTTCGTGAATTCTGACTGTTAA 1035 0.4821 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVDGVFSIDHVDRNVGLFYRVYLPSSADEAQWGIKDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAAVVSVNYRRSPEHRYPCAYDDGWAALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVRAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGESRDHPACNPFGPRGRSLAGLRFPKSLVCVAGLDLLQDWQSAYAKGLEDSGQEVKLLYLQDATIGFYFLPNNEHFYCLMREINNFVNSDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1520 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Pvu1g1520 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Pvu1g1520 344 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Pvu1g1520 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Pvu1g1520 344 SUPERFAMILY alpha/beta-Hydrolases 56 341 IPR029058 -
Pvu1g1520 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Pvu1g1520 344 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1520 Pvu-Chr1 39932357 39935167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1520 1 342 Carbohydrate Esterase AT3G63010 73.761 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1520 K14493 - gmx:100788435 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1520 1 39932357 39935167 Pvu1g1520 1 39932357 39935167 ECH
Pvu1g1520 1 39932357 39935167 Pvu7g1723 7 39975688 39978530 ECH
Pvu1g1520 1 39932357 39935167 Pvu7g1723 7 39975688 39978530 PCT