Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1506 ATGCAACAGCCGCCCCAAAGTAGTCCATATATCAGACCCCACTCTCCTTCCACCCCATCAATACCACTCCTCTTCTCATTTTCTCTTCTCTTCATCCCTTTGCCTAACATGAACAACACTCCCACCCCCACCCACGACTTCATGAACGTCGACTCTTTCTCTCAGCTCCCCTTTCTCCGCCCCTCCCCTCCCTCCAAAGATAAACCCATTCGCCTCTTCGGCCAAGACTTCTCCCAAACCACCCACACCCTCACCAACAACCACCACGCTGACCACAACACCACCAACACACAAAACGCCGAGCCCTCCCGCAGATTCGAGTGCCATTACTGTTGCAGAAACTTCCCCACTTCCCAGGCCTTAGGCGGCCACCAAAACGCCCACAAACGAGAGCGCCAACACGCCAAACGACACCTCCACTCAACCATGCTCCATTCCACCCTCTCCGATCCTTCCACCTACGCTTTCACCAACCCCACCTTCACTTCCTCCGCAATCTCTTATTCTTCTCACCCAACTTGGGATTCTACCGCTGCTCGCGGAAGCTTCTACGGAACCTCCCATTCTCACCAGCTTCAACCCATCAACGGAAGCCCCTTGGGCTTGTGGCGAATCCCCAACGCCACTGCAACCACTCACGCCCAGAGTAACCCTATTTTATACCACCAACGCCCGTCGCCTTTGCTTGCTGGCCAGAACATGGTGACCACTAGGATGGGTCCCTCACCCTCCGGCTCGCAGAACCGGTTTGGTTATGACCTCAAACCCAGCGTAAACGACCATGTGAGTTTGGATCTTCATCTGTAA 807 0.5465 MQQPPQSSPYIRPHSPSTPSIPLLFSFSLLFIPLPNMNNTPTPTHDFMNVDSFSQLPFLRPSPPSKDKPIRLFGQDFSQTTHTLTNNHHADHNTTNTQNAEPSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLHSTMLHSTLSDPSTYAFTNPTFTSSAISYSSHPTWDSTAARGSFYGTSHSHQLQPINGSPLGLWRIPNATATTHAQSNPILYHQRPSPLLAGQNMVTTRMGPSPSGSQNRFGYDLKPSVNDHVSLDLHL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1506 268 PANTHER ZINC FINGER PROTEIN GIS 37 268 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pvu1g1506 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Pvu1g1506 268 SUPERFAMILY beta-beta-alpha zinc fingers 103 134 IPR036236 -
Pvu1g1506 268 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1506 Pvu-Chr1 39613759 39614952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1506 42 268 C2H2 Transcription Factor Family AT3G58070 40.152 8.29e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1506 - - pvu:PHAVU_001G144900g 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1506 1 39613759 39614952 Pvu1g1506 1 39613759 39614952 ECH
Pvu1g1506 1 39613759 39614952 Pvu7g2693 7 50004543 50006197 PCT