Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1499 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGCCCCCCTGCAAGCCAATACACATCTGCACCACCTAGGGGTAGCACATACGGTGGAGGAGGAAACGATAGAGGAGAGCCTAGGGGTATTGCAAAGAGTGCCCCACAGAAAGTGTTGCCAATTGAGATACCCTCTATTCCATTGGATGAGTTAAATAGGTTAACAGGAAACTTTGGTACAAATGCTTTCATCGGCGAAGGTTCCTACGGACGGGTTTACTTTGCAAAATTGAGTGATGGTACTGAGGCTGCAATTAAGAAGCTGGATAACAGTTCTTCCCCAGAACCTGACTCCGATTTCGGGACTCAGTTATCAGTTGTTTCAAGACTGAAGCATGACAACTTTGTTGAGTTGATTGGATATTGTCTAGAGGCAGAAAACAGAATTTTGGTTTACCAACATGCAGGCCTTGGTTCTTTGCATGACGTGTTACATGGAAGGAAGGGGGTACAAGGGGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCCAAAATTGCATTTGGTGCTGCAAAAGGACTTGAGTTTCTTCACGAAAAGGTTCAGCCTTCTATTGTTCATCGCGATGTTAGATCCAGCAATGTCTTACTGTTCAATGACTATGAGGCCAAGATAGCCGATTTTAGCTTGACAAATCAGTCTTCAGACACAGCCGCTCGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGTGATGTTTACAGTTTTGGTGTTGTGCTATTAGAACTCTTGACTGGAAGAAAGCCAGTAGATCACACAATGCCGAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTTGATCCTAAGCTAAACAATGAGTATCCACCAAAAGCTATTGCAAAGTTGGCAGCTGTGGCAGCACTTTGTGTTCAGTATGAAGCAGACTTCAGACCAAACATGACGATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCCCCTGGTCCTGAAACTCATGCTTGA 1092 0.457 MLCCGGAEEESSGPPASQYTSAPPRGSTYGGGGNDRGEPRGIAKSAPQKVLPIEIPSIPLDELNRLTGNFGTNAFIGEGSYGRVYFAKLSDGTEAAIKKLDNSSSPEPDSDFGTQLSVVSRLKHDNFVELIGYCLEAENRILVYQHAGLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPPGPETHA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1499 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 362 - -
Pvu1g1499 363 MobiDBLite consensus disorder prediction 13 27 - -
Pvu1g1499 363 SUPERFAMILY Protein kinase-like (PK-like) 47 348 IPR011009 -
Pvu1g1499 363 PIRSF ILK 34 355 - -
Pvu1g1499 363 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
Pvu1g1499 363 MobiDBLite consensus disorder prediction 1 45 - -
Pvu1g1499 363 PANTHER OS03G0226300 PROTEIN 1 362 - -
Pvu1g1499 363 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1499 363 Pfam Protein tyrosine and serine/threonine kinase 75 348 IPR001245 GO:0004672|GO:0006468
Pvu1g1499 363 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Pvu1g1499 363 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Pvu1g1499 363 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Pvu1g1499 363 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1499 Pvu-Chr1 39436856 39439874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1499 61 349 Receptor kinase-like Gene Family AT4G02010 47.260 3.44e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pvu1g1499 PK_Tyr_Ser-Thr 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1499 - - gmx:100786291 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1499 1 39436856 39439874 Pvu7g2690 7 49931260 49934759 PCT