Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1481 ATGTTTACCTGGATTTCAAATATAGTTTTTTCGTGCTTCAACTCTTTGAGGCACTATGCACGAATGGACAGTGATGATGAAGATGAGTCTTCCTCCACTGGAAACTCGCTTATGTGGCGTAGAGACCTTCAGAGGCATTCTTGTGGTGAATTCTCCTTTGCTGTGTGCCAGGCAAATGGAGAAATTGAAGACTATAGCCAAGTTGAAATTGGCTCTAATGTGCTCTTTGTTGGGATTTATGATGGTCATGGTGGTCCTGAAGCTTCCAGGTTCATTAGAAATCGCATCTTCCAACACATAATAAGGATTGCTCAGGAAAGTAGAACTCTTTGTGAAGGAACTCTGAGAGAAGCTATTGCTGCTACTGAGGATGACTTTATGACTATTGTTAGTAGGAGTTTTAGGATAGATTCCTCAATGGCGCAAGTTGGTTCCTGTGTTCTGGTTGGTTTGATCTGGAGAGGGATTCTATATATCGCCAATCTTGGAGACTCCCGTGCCGTCGTTGGTTGTGCTGGTAGATGTAACTCCATCATTGCTGAACAGTTGACTAGAGACCACAATGTCGGTAGGGAGGATATTAGACAAGAACTTAGGGCTTTGCATCCAAATGATCCAGATATTGTAGTCATGAATCGTGGAGCATGGCGTGTTAAAGGCATCATCCAGGTATCCAGAACCATAGGAGATGCATATCTGAAGACGCCACCATTCTCTCTCGATCCAACATTCCCTCATATCCCGAGTGGACCTCTCGCTGAACCTGTGCTGTCTGCAGAACCATCTCTATTTTCAAGAATTTTGCAACCCAATGACAAATTTCTTATATTTGCATCCGATGGACTTTGGGAACACCTGTCAAATCAGAAAGCAGCTGAGATTGTTAATCGTTATCCACGAAATGGGATTGCAAGAAGACTTGTTAAGACTGCATTAAAGGAGGCGGCTAGAAGAGCGAGGATGGAATATAGGCAGCTTCTGAACGTGAAGGAGGGAGCCAGACGGGTTTATCATGATGACATTACTGTGATTGTTATCTTCTTACGCCAAGAAGCAGATGTTAATGTGCCAGAGTTGTCCGTAAGAGCCTTCGTTGACGCGTCTGGACCATCAAGTTTTCGAACTTTAGGTGATTTGTTGATGCCGTGA 1149 0.4378 MFTWISNIVFSCFNSLRHYARMDSDDEDESSSTGNSLMWRRDLQRHSCGEFSFAVCQANGEIEDYSQVEIGSNVLFVGIYDGHGGPEASRFIRNRIFQHIIRIAQESRTLCEGTLREAIAATEDDFMTIVSRSFRIDSSMAQVGSCVLVGLIWRGILYIANLGDSRAVVGCAGRCNSIIAEQLTRDHNVGREDIRQELRALHPNDPDIVVMNRGAWRVKGIIQVSRTIGDAYLKTPPFSLDPTFPHIPSGPLAEPVLSAEPSLFSRILQPNDKFLIFASDGLWEHLSNQKAAEIVNRYPRNGIARRLVKTALKEAARRARMEYRQLLNVKEGARRVYHDDITVIVIFLRQEADVNVPELSVRAFVDASGPSSFRTLGDLLMP* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1481 382 CDD PP2Cc 51 348 IPR001932 -
Pvu1g1481 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Pvu1g1481 382 SMART PP2C_4 44 346 IPR001932 -
Pvu1g1481 382 Pfam Protein phosphatase 2C 72 316 IPR001932 -
Pvu1g1481 382 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 7 365 - -
Pvu1g1481 382 SUPERFAMILY PP2C-like 56 349 IPR036457 -
Pvu1g1481 382 PANTHER ALPHABET, ISOFORM E-RELATED 7 365 - -
Pvu1g1481 382 Gene3D - 24 355 IPR036457 -
Pvu1g1481 382 ProSiteProfiles PPM-type phosphatase domain profile. 47 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1481 Pvu-Chr1 39172253 39174654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1481 1 373 PP2C-type Phosphatase Gene Family AT5G06750 53.866 3.27e-146 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1481 K01102 - gmx:100806476 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1481 1 39172253 39174654 Pvu1g1481 1 39172253 39174654 ECH
Pvu1g1481 1 39172253 39174654 Pvu2g2424 2 40131044 40139389 ECH
Pvu1g1481 1 39172253 39174654 Pvu7g2676 7 49785408 49789691 PCT