Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1479 ATGAGAATGGAACGAGTGCAGTGTAGCTATGGCTGTCTGGACGAAACGTTCAAAATTAGGAAAGAGATGTTTCACGGCCAACAGTACAGCCATATTTACTTCGCACGCCTTCATTTGATGCGAACTCTGTTGTATTCTCTCGTTCCTCATTGGAAACCTAATTTTCCCGTGTGCACGGTGCTGGAATTGGAAGAGGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAACACATGAAGCTCAAACCTTGTATACTTGACGAGTATTCTAAGCAGAAATCAGCGGTTCCACTTGTCAAGCCACATAACTTCATGCACTCGGATGATTACCTAGTTTTGGAAGATGAAAGTGGGCGGGTTAAGCTCAGTGGAAATATCATTCCGCCCTCTGAATATGTGACAGGAATTGTGGTTGCTTTACTTGGAAAGGAAAGTGGGGCAGGTGATTTTTTGGTTCAGGATGTACTAGATGCTGGCTTACCCCCACAGATAGAATTTCCCCTTAAATCAGGGGAAGACAAATACGTTGTTCTTGTGTCAGGTTTAGGGGTTGGGAGCAGCACCTCTAATTCTCTTCGGTTTCAGCTTCTCATTGATCATATCACAGCGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCGTCAAAAATTGTTCGAGTTGTCTTTGCTGGAAATTTAGTTGAGATACCTCAGAGACTTCTTAACGGACAGGATCTTGCAAAAATGTCTGAGACAATAAGGAAGCTAGACATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCAGGACACAGTGACCCTGCTAATTTCTCATTGCCACAACAGTCATTGCATGGATGCCTTTTCCCCGGGTCTTCCACATATAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCGGGTCAAAATGTAGATGATCTTGAGAATTATTCGGATGCAAAAGATAAACTTGAATTCATGGAAAAGACATTAAGGTGGAGGCATTTAGCACCCACTGCACCTAATACTCTTGGGTGCTTTCCTTATACTGAGAGGGATCCTTTCTTCATTGAGAGCTGTCCTCACGTTTACTTTGTTGGAAATCAAGATAAATTTGAAACTCGGATCATAAAGGGATCAGAAGGGCAGTTAGTGAGACTCATATGTGTTCCTAAATTTAGTGAAACTGGAGTTGCTGTTATGCTTAATCTAAGGGACCTCGAATGTCATGCTCTCAGTTTTGGAACCCAATTCAGCTCATAA 1287 0.4219 MRMERVQCSYGCLDETFKIRKEMFHGQQYSHIYFARLHLMRTLLYSLVPHWKPNFPVCTVLELEEGKECVIVGTLYKHMKLKPCILDEYSKQKSAVPLVKPHNFMHSDDYLVLEDESGRVKLSGNIIPPSEYVTGIVVALLGKESGAGDFLVQDVLDAGLPPQIEFPLKSGEDKYVVLVSGLGVGSSTSNSLRFQLLIDHITAHLGDEKEQSIASKIVRVVFAGNLVEIPQRLLNGQDLAKMSETIRKLDILLSQIAAGLPLDIMPGHSDPANFSLPQQSLHGCLFPGSSTYNTFRSCTNPHCFELDNVRFLGTSGQNVDDLENYSDAKDKLEFMEKTLRWRHLAPTAPNTLGCFPYTERDPFFIESCPHVYFVGNQDKFETRIIKGSEGQLVRLICVPKFSETGVAVMLNLRDLECHALSFGTQFSS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1479 428 Pfam DNA polymerase alpha/epsilon subunit B 176 381 IPR007185 GO:0003677|GO:0006260
Pvu1g1479 428 Gene3D - 167 427 - -
Pvu1g1479 428 CDD MPP_PolD2_C 175 422 IPR041863 -
Pvu1g1479 428 Pfam DNA polymerase delta subunit OB-fold domain 28 155 IPR040663 -
Pvu1g1479 428 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 3 422 IPR024826 -
Pvu1g1479 428 Gene3D - 35 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1479 Pvu-Chr1 39155639 39161784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1479 4 427 Core DNA Replication Machinery Family AT2G42120 70.629 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1479 K02328 - gmx:100780072 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1479 1 39155639 39161784 Pvu1g1479 1 39155639 39161784 ECH