Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1474 ATGTATCAGTATAGTTCCCAAATGTATGGAACTGAATGGGAATCCTACATGGGGATTAGCAACCTGGGAAAGGTTGTTGGATCAGAACAAGTGAGTGTTGTTGACCCCAAAAACTCACCCTTCAACATTGTCACCAATCCTTTTCAAATTCAAACCCCACAAGGCTTTTGTGCAAGTGCAACAAAAGGCCTTCTGAGTTTTCAAGCTCAACAACATGGTCATCATCAGCATCAGATTGAAGTTCCTTCTTGGAGCTTTGAGTTTCCAAAGACCACAACAACTGACTCTCACATGCTGAATATTCGCCAAGCCTCTGGGGATAACTTCGCCACAATCACCACTAAACAAGATCCACCCTCCTCTCAATTCACAAGCTCCTTGTGCCCGGTTGCTGAATCCTTCTTGTCGTCCAGCACTGATGCAGATTGCCCTTCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAATATAGTAGTATGCAGCCTGATGGTATGCCATATTACGATCACTGTTCACAAGAAGAAGATAAATTACTGAGAGATGATGCTGCCACGCACGAAAGGCCCCTTGAAATTTCTTTTCAGAGAAACCAGTTGGAGTCGTGTACAAAGCCACATAAGCAAGCTCCTCATCGGCTTTGTGGGGTTACCTGTGTAACTTCTAGCAACTCTGTTTCTAGGAGAGGCAAAAGAAGAGTAAAATGGACCAACGATCTACACGAGCCATTTATGATGATTGTTAATAGTCTTGGTGGTCCAGAAAAGGCAAAACCTAAGGCTATACTAGATAAGATGAAATCAGATTTGCTGTCCATTTCTCATGTTAAAAGTCATTTACAGAAATGTAGGTCTACAATACACGTGCACAAAACTTTGCAGGAAAAATCCAAGGAAGGACAAGGAATGGATGGGGTGGCTGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCAAGGCAACTACAGCTAGAGGTTCGGAGGAATATTTGCCAACAACTAGAGATGCAACGAAATTTGCAAATGCTGATTCAACAGCAGAGCCAGCAACTCAAAGTAATGTTAGATTACCAAAAGAAAAAAAACCAAACAGAAGAAGACCCTTGA 1116 0.4149 MYQYSSQMYGTEWESYMGISNLGKVVGSEQVSVVDPKNSPFNIVTNPFQIQTPQGFCASATKGLLSFQAQQHGHHQHQIEVPSWSFEFPKTTTTDSHMLNIRQASGDNFATITTKQDPPSSQFTSSLCPVAESFLSSSTDADCPSSSEKYCKITSYSEKYSSMQPDGMPYYDHCSQEEDKLLRDDAATHERPLEISFQRNQLESCTKPHKQAPHRLCGVTCVTSSNSVSRRGKRRVKWTNDLHEPFMMIVNSLGGPEKAKPKAILDKMKSDLLSISHVKSHLQKCRSTIHVHKTLQEKSKEGQGMDGVAELQVKIHMQIEESRQLQLEVRRNICQQLEMQRNLQMLIQQQSQQLKVMLDYQKKKNQTEEDP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1474 371 SUPERFAMILY Homeodomain-like 232 288 IPR009057 -
Pvu1g1474 371 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 233 287 IPR006447 GO:0003677
Pvu1g1474 371 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 17 368 - -
Pvu1g1474 371 Gene3D - 232 289 - -
Pvu1g1474 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 17 368 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1474 Pvu-Chr1 39080732 39083317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1474 222 361 G2-like Transcription Factor Family AT4G28610 42.958 1.79e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu1g1474 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1474 - - gmx:102662952 545.814