Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1466 ATGATTCGCCACTTTCTCTATGTGCATCTTAATCTCTTTGTATTTTCAATTTTGATTTCTCTGAGCTTGGCGTTCACGCATCAACACGAAGTGTCAGCTCTCCAGGATCTATACAGGACCTTTAACTACCCACCGATGCTCAAAGGATGGAATGGTAGCGATCCTTGTGAAGAGTCTTGGACAGGAGTTGCTTGTTCTGGGCCATCAGTTATACAGCTAAAACTTCAAGGATTAAACCTCACTGGGTATATTGGAAGCCTGCTATATAATCTACCTAACTTGAAGCAACTTGATGTCAGTTCAAATAACATAAAGGGCGAGATACCATTCGGTTTGCCCCCCAATGTCTCCTATATGAATTTAAGCCACAATTTACTACATGGACCAATTGGTGATGTATTTACTGATTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTCTCAGGAGACCTACCGTATTCATTTGGTTCCTTAAGAAACCTTGCCAGATTGTTCCTGCAGAATAACAGATTCACTGGATCAGTCGCCTACTTGGCTGAACTTCCACTAACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCATTCTTCCGCAGCATTTTCAATCCATACGGAATTTATGGATTGGAGAGAATAAATTCCATGTGGCCGACAACTCTCCTCCCTGGACTTTTCCGCTGGATACCGTGTCAGTTGTGCAGAACACTAGTAGCCCACCCACGACTCAGGCAAATGCCATAGAGAATTATTCCCCTCCCACAGTAAGTGAGGCTCCTCCCAGAGTAAATGAGGTTCATCCCAGGGTAAATGAGACTCCTCCCAGAGTAAGTGACGTTCTTCCCCAAGTACACGAGGCTCCTCTCAGAGTAATTAAGCACAAGAAAAATCATGTAGGTCCCGGAGGAATAGCATTTATGATTGGTGGAGGAACACTGATGGCCACAGGGGTGGCTCTCTTTGTTGCAATCCGTTTGAATAAACTTCGTCTACAGAGCCCGAACTTGAAGAGCTCAGAAAACAACCATGGTTCATTTCATTCTTATCCGACCAGTGCAACCATAGGGGTATCTTCTACCGCACTCCAGGAGAGCCCACACATTCCCCCCTTCAATTCTGCATCCTTTTTGGGTCCTGTGAGATTACTTTCCATGAACCATAACAATACCGAGGAACCATTCAAAAAAAGTTTTTCTACAAGAGGCAGATCCACTGGAATAACGAAAATTTACACGGTAGCAGAGCTCGAGTTAGCTACTAATTGCTTCAGTGAAGCCAACATTCTGGGAGAGGGATCTCTTGGTCCTGTTTATAGAGCTAATTTTCCGGATGACAAAATTTTGGCCGTGAAGAAGATAAACTTTTCTTTCAAAGAAGAGGAAAAGCTCTTGGATGTCATTTGCACGGTTTCCCGACTGAAGCACCCCAACATCGTAGCACTCAATGGTTACTGTTTGGATAACGGAAAGGGTTTATTTGTTTACGATTATGTTGGAAATGTCACTCTAAACGACGCTCTTCACAACGAGGCATGCAAACCTCTGTCATGGGTTCACCGTCTCCGGATTGCTCTAGGTGTGGCTCAGGCTCTACACTATTTGCACTCAGAGTTCTGCCCTCCCGTGGCTCACGGCAATTTGAAGGCTGCCAATGTTCTACTGGATGAAAATTTGATGCCTCATGTTTGTAACTGTAGCTTGGTTACTTTGAGAGCACTGAATATCAATCAAGTTGAATTTCCGGCTAATGAGATTTATATTGAAGAGATGGGCTACGTTTCGCCAGATCATGGCCAACCAGGAACCAGCAGCAGAAAGAGAGACGTTTTTGCCTTCGGGGTGTTGCTTCTGGAACTGTTAACTGGAAAGAAAGCTTTCGATAGAGCCAGGTTAGGGGAGGAGCAATATCTGGTGAAATTGGCTCCCCCCATGCTTCCTTATAGAGCGAGTTTGGAACAACTGGTGGATCCCCGCATGAAAAGAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCTCTCTGTATACAGCCTGTAAGGCAACAACGTCCTGCAATGACCGAAGTTATGGAGTCTCTTAAATCTTTATACGAAAATGAAACGAGCGATGTAGCAGATGGTACTGAACTTGATCCATTTTAG 2157 0.4367 MIRHFLYVHLNLFVFSILISLSLAFTHQHEVSALQDLYRTFNYPPMLKGWNGSDPCEESWTGVACSGPSVIQLKLQGLNLTGYIGSLLYNLPNLKQLDVSSNNIKGEIPFGLPPNVSYMNLSHNLLHGPIGDVFTDLDNLKEMDLSYNNFSGDLPYSFGSLRNLARLFLQNNRFTGSVAYLAELPLTDLNIQDNLFSGILPQHFQSIRNLWIGENKFHVADNSPPWTFPLDTVSVVQNTSSPPTTQANAIENYSPPTVSEAPPRVNEVHPRVNETPPRVSDVLPQVHEAPLRVIKHKKNHVGPGGIAFMIGGGTLMATGVALFVAIRLNKLRLQSPNLKSSENNHGSFHSYPTSATIGVSSTALQESPHIPPFNSASFLGPVRLLSMNHNNTEEPFKKSFSTRGRSTGITKIYTVAELELATNCFSEANILGEGSLGPVYRANFPDDKILAVKKINFSFKEEEKLLDVICTVSRLKHPNIVALNGYCLDNGKGLFVYDYVGNVTLNDALHNEACKPLSWVHRLRIALGVAQALHYLHSEFCPPVAHGNLKAANVLLDENLMPHVCNCSLVTLRALNINQVEFPANEIYIEEMGYVSPDHGQPGTSSRKRDVFAFGVLLLELLTGKKAFDRARLGEEQYLVKLAPPMLPYRASLEQLVDPRMKRTFSSKALSRYADIISLCIQPVRQQRPAMTEVMESLKSLYENETSDVADGTELDPF* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1466 718 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 713 - -
Pvu1g1466 718 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Pvu1g1466 718 MobiDBLite consensus disorder prediction 239 255 - -
Pvu1g1466 718 Pfam Protein tyrosine and serine/threonine kinase 429 698 IPR001245 GO:0004672|GO:0006468
Pvu1g1466 718 Gene3D Ribonuclease Inhibitor 25 249 IPR032675 -
Pvu1g1466 718 ProSiteProfiles Protein kinase domain profile. 425 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1466 718 MobiDBLite consensus disorder prediction 239 264 - -
Pvu1g1466 718 SUPERFAMILY L domain-like 28 219 - -
Pvu1g1466 718 SUPERFAMILY Protein kinase-like (PK-like) 405 698 IPR011009 -
Pvu1g1466 718 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
Pvu1g1466 718 PANTHER OS01G0253100 PROTEIN 2 713 IPR045271 GO:0004714|GO:0006468
Pvu1g1466 718 Gene3D Transferase(Phosphotransferase) domain 1 501 714 - -
Pvu1g1466 718 Gene3D Phosphorylase Kinase; domain 1 387 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1466 Pvu-Chr1 38918881 38922056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1466 12 718 Strubbelig Receptor Gene Family AT5G06820 46.257 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pvu1g1466 PK_Tyr_Ser-Thr 6.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1466 - - vra:106757519 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1466 1 38918881 38922056 Pvu7g2656 7 49622307 49626372 PCT