Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1463 ATGGGTCCCCAAAGCAACCTCCTATCTCTTTTGGTTGCTCTGGCCGCAGTTTTTGCATATTTGTATCTCATAAATCCAATTCCACAGTTTCTCATTAATCCAATTTCACAGGATCTCATAAATGCCTTGTCACCTTCATCTGCATACTTGGCAAAACCTTTAACAGGGAACTTCCACCGACATCACAAGAAACACCCTAGTGGTGGGAATACTGATTCTATTTGTGATGATTTTCCATCAGGAATTCCACCTCCAAATACCAATACAACTTCGTATCTTTGTGTTGATCGAAGAGGGTGTTGTAATTTCACAACAGTACAAGCAGCCGTGAATGCAGTTCCAGATTTTAGTGTCAAAAGAACCATAATATGGATAAACATTGGCATGTACTATGAGAAGGTTATGGTGCCCAAAACAAAACCCAACATTACATTTCAAGGACAAGGCTATACTTCAACTGCAATTGCATGGAATGACACCGCATTATCCGCGAATGGAACATTTTATAGTGGCTCTGTTCAAGTTTTCGCCTCCAATTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATGCCAAGTCCTGGGGCTGTTGGGGCACAAGCTGTAGCTATTAGAGTATCTGGAGATCAATCTGAATTTAGGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCACGATGATAAGGGTCGCCATTACTTCAAAGATTGCTACATTCAAGGCTCCATTGACTTCATATTCGGCAATGCAAGGTCCCTCTACGAGAATTGTCAAATAGTTTCTATAGCGAACCCCGTACCAGTGGGACAAAGGAGCATAAATGGTGCTGTTACAGCTCATGGTAGAGTTTCAGGTGATGAAAATACAGGGTTTGCATTTGTGAACTGTACAATTGGAGGAAACGGTAGAATATGGTTGGGTCGAGCATGGAGACCTTATTCTCGTGTTGTCTTTGCCTCCACATTAATGTCAGATATTATTGCTCCTGAAGGTTGGAATGATTTCAACGACCCTTCTAGAGACCAGACTATCTTCTATGGAGAATATAATTGCTCGGGCTCAGGGGCTAACACGAACTTGAGGGCTTCTTATGTACAGAAATTAAATGAAACAGAAGCTTCTGCTTTCTTCAACACTACTTTTATAGATGGCGACCAATGGTTGGAAACTTCTAAATAA 1185 0.4127 MGPQSNLLSLLVALAAVFAYLYLINPIPQFLINPISQDLINALSPSSAYLAKPLTGNFHRHHKKHPSGGNTDSICDDFPSGIPPPNTNTTSYLCVDRRGCCNFTTVQAAVNAVPDFSVKRTIIWINIGMYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGAVGAQAVAIRVSGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQIVSIANPVPVGQRSINGAVTAHGRVSGDENTGFAFVNCTIGGNGRIWLGRAWRPYSRVVFASTLMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGSGANTNLRASYVQKLNETEASAFFNTTFIDGDQWLETSK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1463 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 392 - -
Pvu1g1463 394 Gene3D - 86 394 IPR012334 -
Pvu1g1463 394 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Pvu1g1463 394 Pfam Pectinesterase 95 387 IPR000070 GO:0030599|GO:0042545
Pvu1g1463 394 PANTHER PECTINESTERASE 8-RELATED 6 392 - -
Pvu1g1463 394 SUPERFAMILY Pectin lyase-like 92 391 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1463 Pvu-Chr1 38894416 38896314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1463 73 393 Carbohydrate Esterase AT1G05310 74.455 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1463 - - gmx:100806629 709.523