LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g1451	ATGGCTGATTATTACCAAGACTACATCCTGCTTTTCATCACATGTTTAGTCTCCACAATCGTGGTTCGAGCCATACTCAGCAGAAAACAAAACAAGAGTAATAGACCACCAAGTCCACAAGCCTTACCCATCATTGGACATCTCCACCTTCTTGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTCTACTCGCTATGGACCCATAATGCATCTTTTCCTTGGCTCTGTGCCTTGTGTCATTGCTTCCACACCCGAAGCTGCTAGAGAATTCCTTAAAACTCACGAAACCCGTTTCTCCAACCGCCCGCAAAGTTCTGCAGTTGATTTTCTAACATATGGCTCCCAGGACTTCTCTTTTGCGCCATATGGACCTTATTGGAAATTCATGAAGAGAATATGCATGTCGGAACTTCTGGGGGGTCCCACGCTAAGTCAGCTACTTCCTGTGAGGAGACAAGAGACGTTAAGGTTTCTGAGGCTTGTGCTCAATAAAGGGGAGGCGGATGAGGCTATTGATGTTGGGAGAGAACTTTTGACGCTCTCGAATAATGTTGTGTCGAGGATGATTATGAGCCAAACATGTTCTCAAGATGACACTGAAGCTGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACTGGGAAGTTTAATGTGTCAGATTTCGTTTGGTTCTTTAAGAACTGGGATGTGCAGGGGTTCGGGAAAAGACTCAAGGAAATTCGAGACAGGTTTGACACCATGATGGAGAGGGCGATCAAGGAGCATCAAGAGGAAAGGAAGAAGAGAAAGGAAGTGGGAAGTGGAGGAGATGGCCAAATCAAGAATCTACTTGATGTATTATTGGACATACATGAAGATGAGAACTCTGACATAAAATTGACAAAAGAGAACATAAAGGCCTTCATCTTG	918	0.4477	MADYYQDYILLFITCLVSTIVVRAILSRKQNKSNRPPSPQALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVIASTPEAAREFLKTHETRFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKRICMSELLGGPTLSQLLPVRRQETLRFLRLVLNKGEADEAIDVGRELLTLSNNVVSRMIMSQTCSQDDTEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRDRFDTMMERAIKEHQEERKKRKEVGSGGDGQIKNLLDVLLDIHEDENSDIKLTKENIKAFIL	306

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g1451	306	SUPERFAMILY	Cytochrome P450	31	305	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	Gene3D	Cytochrome P450	27	306	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	Pfam	Cytochrome P450	36	305	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	PRINTS	E-class P450 group I signature	63	82	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	PRINTS	E-class P450 group I signature	87	108	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	PRINTS	E-class P450 group I signature	181	199	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu1g1451	306	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	5	306	-	-
	Pvu1g1451	306	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	5	306	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g1451	Pvu-Chr1	38777915	38778832	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu1g1451	6	306	Cytochrome P450	AT5G06900	48.515	8.24e-100	300

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g1451	K24188		-	pvu:PHAVU_001G1395001	607.06

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1451	1	38777915	38778832	Pvu7g2650	7	49553235	49555012	PCT