Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1448 ATGCGTAGTTGTCTCCAAGTCGCCAAAGAAGTCATGAAAACACATGACCTCAATTTCTGTAACCGACCCCAGTTTGGATCCTCAGAGAACTACTTATACAAAGGCTCTGATTTCATCACTGTGCCATATGGTCCTTATTGGCGCTTCATCAAAAAGCTTTGCGTTACTCAACTTCTCTCCACCGCGCAGCTTGGGCGCTTACGGCACATCCGGCAGCAGGAGATAGAGAAGCTCTTGAAATCTCTCCTGGAGTGTTCCTCTGAAGCCAGGGAAACGGATTTGAGCCGTGATCTTTCTGCTTTGACCAACAATGTCCTGTGTCGGATGGCCATGAATACGACCTGTTTGGATGACGTTAATGATGGTGAGGATATTATTAGCCTGGTAACAGAGTTTATGCACTTGGGAGCCAAGTTGAGCATGGGTGAGGTGTTGGGACCTTTGGGAAAGTTTGACTTGTTTGGTTATGGGAAGAAGCTTGTCAGAATAGTCGGTAAATTCGACCAGATTTTGGAGCGCATCTTACAGGAACATGAAGCGAACAACTCCGAAAGAGGGGACATGATGGATATTCTATTGCAAGTCCACAAAGATCCAAATGCTGAGATGAGGTTAGCAAGGAATGATATCAAGGCCTTCTTCCTGGATATTTTCCTAGCGGGAACAGACACGTCTTCAACAGCGGCCCAATGGGCCATGGCAGAAATCATGAACAGGTACCTTCCATTTGGATCTGGGAGGAGGGGATGCCCTGGGTCTTCACTTGCCTTAACGGTTATACAAGGGACAGTTGCATCACTGATCCAATGTTTTGAATGGAAGACGAAAGGGGGAGAGAGGGTTTGTTTGGAAGAAGGATCATCATTTTCTACAGGATTGGCAAAACCACTTGTTTGTTATCCTGTCACTCGTTTTAATCCTTTTTAA 927 0.4585 MRSCLQVAKEVMKTHDLNFCNRPQFGSSENYLYKGSDFITVPYGPYWRFIKKLCVTQLLSTAQLGRLRHIRQQEIEKLLKSLLECSSEARETDLSRDLSALTNNVLCRMAMNTTCLDDVNDGEDIISLVTEFMHLGAKLSMGEVLGPLGKFDLFGYGKKLVRIVGKFDQILERILQEHEANNSERGDMMDILLQVHKDPNAEMRLARNDIKAFFLDIFLAGTDTSSTAAQWAMAEIMNRYLPFGSGRRGCPGSSLALTVIQGTVASLIQCFEWKTKGGERVCLEEGSSFSTGLAKPLVCYPVTRFNPF* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1448 308 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 239 - -
Pvu1g1448 308 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 239 308 - -
Pvu1g1448 308 Gene3D Cytochrome P450 238 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 Pfam Cytochrome P450 239 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 Pfam Cytochrome P450 6 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 243 252 IPR017972 GO:0005506|GO:0016705
Pvu1g1448 308 Gene3D Cytochrome P450 3 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 3 239 - -
Pvu1g1448 308 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 239 308 - -
Pvu1g1448 308 SUPERFAMILY Cytochrome P450 6 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 PRINTS E-class P450 group I signature 7 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1448 308 PRINTS E-class P450 group I signature 209 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1448 Pvu-Chr1 38759534 38763001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1448 209 308 Cytochrome P450 AT2G42250 47.000 5.84e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1448 - - pvu:PHAVU_001G139200g 607.831