Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1441 ATGCCAATGCATCATCTTCTTATATCACTCCTTCTCTTCTTCGTCCTTCCTCCAACTACCTCTCTCAACTCAGACGGCCTCTCCCTCCTCGCCCTCAAAGCGGCCGTCGACTCCGACCCCACCGCCGTTCTCAGCTCCTGGTCGGAAAACGACGCCACTGCATGCCACTGGCCCGGCGTCTCCTGCGCCGGCGACAGAGTTACCCAACTCTCTCTCCCTGACAAGAACCTCAGCGGTTACATTCCCTCCGAACTGGGATTTCTCACCTCCCTCAAAAGACTGAGTCTTCCACACAACAAGTTCTCCAACGCCATTCCTCCCTCTCTCTTCAACGCCACCACCCTCATTGTCCTTGACCTCTCTCACAACTCGCTCTGTGGTTCCCTTCCCTCACACTTTCTCTCCCTAAAGCTCCTTCGCCATTTGGACCTCTCCTCCAACTATCTCAACGGTTCCCTCCCTTCTACCCTCTCCGATCTCACTTCTCTCACCGGAACTCTCAATCTTTCTTTCAACCTCTTTTCCGGCGGGATTCCGGCCACCCTTTCTAACCTGCCTGTGGCTGTGAGCCTCGACCTCCGCAACAACAACCTCACCGGAAAAATCCCCCAGGTGGGGTCCCTGCTAAATCAGGGTCCCACCGCGTTTTCTGGCAACCCTGGACTCTGTGGCTTCCCCTTGCAAACTGCGTGTCCCGAAGCGCAAAAGCCTGGGATTTTCGCCAACCCTGAAGAGGGATTCCCTCAGAACCCCAATGCGCTTCACCCCGAAGGCTCAGACCAGAGACTGAAACCGCACGGTGGTGGCTCCGTCGCGGTTCTTGTCATCTCTGGGCTTTCCGTCGCGGTTGGAGCGGTTTCTCTCTCGCTGTGGGTTTTCCGGCGACGGTGGGGAAGCGGCGAGGAGGCGAAATTGGGGGGGCAGAAGTTGGAGAGCGAGGTGGATGCGGGAGAGGGTCAAGATGGTAAATTTGTTGTGGTGGATGAAGGGTTTGAGTTAGAGTTGGAGGATTTGCTTAGGGCGTCTGCGTATGTTGTTGGGAAGAGTAGGAGTGGCATTGTGTACAAGGTTGTCGGGGTCGGAAGAGGGTCTTCCTTGGCGGCGAATGCGGTGGCTGTACGGCGACTCAGTGAGGGTGATGCCACGTGGCGATTTAAGGAGTTTGAGTCTGAAGTGGAGGCCATAGCAAGGGTTCGTCACCCCAATGTTGTTCCGTTGAGAGCTTATTATTATGCGCATGATGAGAAGCTGCTCATCACCGATTTCATTCGCAATGGAAGCTTGCACACTGCTTTGCACGGTGGGCCTTCCAATTCATTGCCACCATTATCATGGACAGCACGGTTAAAAATTGCTCAAGAAGCAGCCAAGGGCTTGATGTATATACACGAGTTCAGTGGTCGCAAATATATCCACGGCAACATTAAGTCAGCAAAAATCTTACTAGACGATGAGCTCCATGCATACGTGTCAGGTTTTGGACTTTCTCGGCTTGGTTTGGGCCCGCCAAAGTCTACTACAATGGCTCCAAAACGGAACAGCTTGAACCAATCCTCTATAACCACTGCAATGAGTTCAAAGGTTGCAACTTCCTTTTACCACTACCTGGCACCTGAGGTGCGCATGGCTGGTGGCAAGTTCACTCAGAAATGTGATGTGTATTCATTTGGCATTGTCCTTTTGGAACTTTTGACGGGTAGGATGCCAGATTTTGGAGCAGAAAATGATGACAAGGTGCTGGAGAGTTTTGTTAGGAAAGCATTCAAGGAGGAGCAGCCACTGTCTGATATCATTGACCAAGCACTCATCCCTGAAGTTTATGCTAAAAAGCAAGTCATTGCTGCATTCTATATTGCTCTGAACTGCACTGAACTCGATCCAGAGTTGCGACCAAGAATGAAAACCGTGTCTGAGAGCCTTGATAACATCAAATACAGTGAAAAACAAGAAAACTATGTATAG 1962 0.5168 MPMHHLLISLLLFFVLPPTTSLNSDGLSLLALKAAVDSDPTAVLSSWSENDATACHWPGVSCAGDRVTQLSLPDKNLSGYIPSELGFLTSLKRLSLPHNKFSNAIPPSLFNATTLIVLDLSHNSLCGSLPSHFLSLKLLRHLDLSSNYLNGSLPSTLSDLTSLTGTLNLSFNLFSGGIPATLSNLPVAVSLDLRNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQTACPEAQKPGIFANPEEGFPQNPNALHPEGSDQRLKPHGGGSVAVLVISGLSVAVGAVSLSLWVFRRRWGSGEEAKLGGQKLESEVDAGEGQDGKFVVVDEGFELELEDLLRASAYVVGKSRSGIVYKVVGVGRGSSLAANAVAVRRLSEGDATWRFKEFESEVEAIARVRHPNVVPLRAYYYAHDEKLLITDFIRNGSLHTALHGGPSNSLPPLSWTARLKIAQEAAKGLMYIHEFSGRKYIHGNIKSAKILLDDELHAYVSGFGLSRLGLGPPKSTTMAPKRNSLNQSSITTAMSSKVATSFYHYLAPEVRMAGGKFTQKCDVYSFGIVLLELLTGRMPDFGAENDDKVLESFVRKAFKEEQPLSDIIDQALIPEVYAKKQVIAAFYIALNCTELDPELRPRMKTVSESLDNIKYSEKQENYV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1441 653 Gene3D Ribonuclease Inhibitor 166 233 IPR032675 -
Pvu1g1441 653 Gene3D Phosphorylase Kinase; domain 1 323 422 - -
Pvu1g1441 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 645 - -
Pvu1g1441 653 MobiDBLite consensus disorder prediction 243 262 - -
Pvu1g1441 653 Pfam Protein tyrosine and serine/threonine kinase 346 640 IPR001245 GO:0004672|GO:0006468
Pvu1g1441 653 Gene3D Transferase(Phosphotransferase) domain 1 423 652 - -
Pvu1g1441 653 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pvu1g1441 653 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 4 645 - -
Pvu1g1441 653 ProSiteProfiles Protein kinase domain profile. 340 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1441 653 SUPERFAMILY Protein kinase-like (PK-like) 345 640 IPR011009 -
Pvu1g1441 653 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Pvu1g1441 653 SUPERFAMILY L domain-like 25 228 - -
Pvu1g1441 653 Gene3D Ribonuclease Inhibitor 21 165 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1441 Pvu-Chr1 38609084 38612821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1441 22 644 Receptor kinase-like Gene Family AT3G57830 58.307 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu1g1441 PK_Tyr_Ser-Thr 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1441 - - gmx:100796011 1093.57