Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1395 ATGGTCGAATCGTTTCTCTTCAGCATCGCCGACTCACTCATAGCAAAGCTTGCGTCTCAGCTGTATGAAGAAGCTTCTCGGGTGATGGGTTTGTACCACCATCTGCAAGAGTTTACACACACTCTCTCGTTAGTGAAGGCTGTGTTGTTGGATGCTGAGCAAAAGCAGGAGCACAACCATGAGCTGCGGGAATGGCTAAGGCAGCTCAAACGTGTCTTCTCCGATGCCCAAGATCTGTTGGATGAATTTGAGTGCCAAACACTGCAAAATCAAGTTGTCAAAGCTCATGGTACTACCAAAACCAAGGTAGGTCGCTTCTTCTCAAGCTCTAATCCACTTGTTTTTCGTTACAAGATGGCTCAACAAATTAAAGATATCACCAACAGACTAGACAAGGTTGCAGCTGATAGGCGTAAGTTTGGGCTTCAAACAATTGATGTTGACACACGTGTTGTGCATCGGATAGAGATGACACACTCCCATGTGAATGATTCAGATGTGATTGGAAGGGAACATGACAAAGGAAAGATCATACATATTTTGATGCAGAAGAATGGCATTGATATTGATAAAAGTCTCTCTGTTATCCCCATTGTGGGGATGGGAGGTTTGGGAAAGACCACACTTGCAAAGTTTGTGTTTAATGACGACAGGATAAACGAGTGCTTCCCATTGAAGATGTGGGTGTGTGTTTCTGAAAACTTTGACATTAAGCAAATGATTGTTAAAATCATCAATTCTGCTAACGATTCTGCTTCACACGCTCATGCTCCTGATTTCCAACAGAATTTGAACATACTAGACATGGAGCAACTGCAAAATCAATTGAGAAACAAACTTGCTGGTAAAAAATTCTTACTCATCTTGGACGATGTATGGAATGAAGACCGTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGTAGGTGCTGCTGCTGGAAGTAAAATTCTAGTGACTACACGCAGTCACTCCATTGCATCTTTGATGGGCACGGTTTCCTCTCACATTTTACAAGGTCTTTCTTTGGAAGATTCAACGTCTCTGTTTGTCAAATGGGCATTTAAAGAAGCAGAAGAGGAAAATTATCCTCATTTGATAAACATTGGCAGAGATATTGTGAAAAAATGCAGAGGGGTTCCATTGGCAGTGAGAACTATAGGGAGTTTACTATTTTCCAAATTCGAAGCAAATGAGCGGGAATATGTGAGAGACAGTGAAATTTGGAATTTGCCACAGAAAAAAGAGGATATTTTACCTACACTCAAATTAAGTTATGATCTTATGCCATCCTATTTGAGGCAATGCTTTGCTTTGTTTTCCCTTTATCCAAAGGATTACGAATTCGTCAATTTCGAGGTAACTACGCTTTGGGGTGCACTCGGACTCCTTGGGTCTCTGAAAAAGAATATGACACAAGAAGATGTTGCCAATCAGTATTTCAATGAACTACTGTCAAGATCTTTTATTCAAGATTTTGTCAGCTGTGGGACAGCTTATACATTTAAAATACATGACGTGGTGCATGATCTAGCCCTGTTTGTGGCAAAAGATGAGTGTCTACTTGTAAATTCCCACATTCGATGTATACCTGAGAGTATTCGTCATCTGTCTTTTGTTGAAAACGATTTGGATGGCAAATCATTCAGTGCAAAATCAGTAGGTGTGAGAACCATTCTCTTTCCTAAGGATGGTGTGGGTGCCAATAGTGAAGCTTTCTTTACATTGGTTTCAAGGTACAAATACTTGCATATTTTGGATTTAAGTTATTCTTCTGTTGGAACTTTGCCTGGTTTCATTGGGAAGTTAAAACATTTGAGATATCTCAGTCTTTATAATAATAAGAAAATCAGGGGACTCCCTGATTCTATTTGTGAGCTTCAAAGTTTGCAAGTGTTGGACCTTGGTGGATGCCAGGAGCTGGAAGCATTGCCCAAAGGACTAAGAAAATTGATCAGTCTCCGAGATTTTGTCATAACCACAAAGCAAGCTGTTTTGCCAGAGAATGACATTGCAAACTTGAGCTGTCTTCAGTATTTGACTATTGAATGTTGTGATAATGTGGAGTCTTTATTCTCAGGGATAGAACTTCCTCATCTGAAAGCATTAAATGTTAGTAGCTGTAAGAGACTACAGTATTTGCCACTTGACAGTAAGCATTTTCCTGCATTAGAGATTTTGTGTATTAGGATTTGTGACAAATTGGGATTGTCCAAGGGTCCTGAAGATCAGAAGTTCATCTTAAAGTTAAAAACAATACTATTTACTTCACTGCCACAGCTAGGGACATTGCCTCATTGGCTTCAAGGATCTATTAGCACATTACTATCCTTGAGACTAGAACACTGCCACAATCTCGAGGTGCTTCCGGATTGGCTGCCAATGCTAACTTCTCTGAAAGCACTTGACATCACAGATTGCCCGAAGTTGCGTTCTCTTCCAGATGGCATCAATTGCCTCACTGCCCTTGAACGTTTGGAAGTCATAGACTGTCCTGAATTATTCAGAAAATTCACTCTGCAAGTTGGAGAGCATTGGAACCAAATGTCACATATCAAACGGATTAGCATGTTTGAAAGAAAAGATCTGGAATAA 2595 0.4012 MVESFLFSIADSLIAKLASQLYEEASRVMGLYHHLQEFTHTLSLVKAVLLDAEQKQEHNHELREWLRQLKRVFSDAQDLLDEFECQTLQNQVVKAHGTTKTKVGRFFSSSNPLVFRYKMAQQIKDITNRLDKVAADRRKFGLQTIDVDTRVVHRIEMTHSHVNDSDVIGREHDKGKIIHILMQKNGIDIDKSLSVIPIVGMGGLGKTTLAKFVFNDDRINECFPLKMWVCVSENFDIKQMIVKIINSANDSASHAHAPDFQQNLNILDMEQLQNQLRNKLAGKKFLLILDDVWNEDRVKWVELRNLIQVGAAAGSKILVTTRSHSIASLMGTVSSHILQGLSLEDSTSLFVKWAFKEAEEENYPHLINIGRDIVKKCRGVPLAVRTIGSLLFSKFEANEREYVRDSEIWNLPQKKEDILPTLKLSYDLMPSYLRQCFALFSLYPKDYEFVNFEVTTLWGALGLLGSLKKNMTQEDVANQYFNELLSRSFIQDFVSCGTAYTFKIHDVVHDLALFVAKDECLLVNSHIRCIPESIRHLSFVENDLDGKSFSAKSVGVRTILFPKDGVGANSEAFFTLVSRYKYLHILDLSYSSVGTLPGFIGKLKHLRYLSLYNNKKIRGLPDSICELQSLQVLDLGGCQELEALPKGLRKLISLRDFVITTKQAVLPENDIANLSCLQYLTIECCDNVESLFSGIELPHLKALNVSSCKRLQYLPLDSKHFPALEILCIRICDKLGLSKGPEDQKFILKLKTILFTSLPQLGTLPHWLQGSISTLLSLRLEHCHNLEVLPDWLPMLTSLKALDITDCPKLRSLPDGINCLTALERLEVIDCPELFRKFTLQVGEHWNQMSHIKRISMFERKDLE* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1395 864 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 748 - -
Pvu1g1395 864 CDD RX-CC_like 8 134 IPR038005 -
Pvu1g1395 864 Gene3D - 10 124 - -
Pvu1g1395 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 439 IPR027417 -
Pvu1g1395 864 Gene3D Ribonuclease Inhibitor 520 686 IPR032675 -
Pvu1g1395 864 Gene3D - 426 513 IPR036388 -
Pvu1g1395 864 Gene3D Ribonuclease Inhibitor 697 854 IPR032675 -
Pvu1g1395 864 Pfam Rx N-terminal domain 12 98 IPR041118 -
Pvu1g1395 864 Gene3D - 149 337 IPR027417 -
Pvu1g1395 864 PRINTS Disease resistance protein signature 195 210 - -
Pvu1g1395 864 PRINTS Disease resistance protein signature 279 293 - -
Pvu1g1395 864 PRINTS Disease resistance protein signature 377 391 - -
Pvu1g1395 864 PRINTS Disease resistance protein signature 625 641 - -
Pvu1g1395 864 SUPERFAMILY L domain-like 503 835 - -
Pvu1g1395 864 Gene3D - 340 425 IPR042197 -
Pvu1g1395 864 Coils Coil 66 86 - -
Pvu1g1395 864 Pfam NB-ARC domain 171 427 IPR002182 GO:0043531
Pvu1g1395 864 Pfam Leucine rich repeat 583 639 IPR001611 GO:0005515
Pvu1g1395 864 PANTHER DISEASE RESISTANCE PROTEIN RP 6 748 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1395 Pvu-Chr1 37814346 37817113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1395 178 834 WRKY Transcription Factor Family AT5G45050 21.554 2.14e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1395 - - gmx:100805394 1214.52