Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1391 ATGGCCGAATCATTTCTCTTCAGCATTGCAGAGTCACTCATAGCAAAGCTTGCTTCTCATGCTTTTCAAGAAGCTTCTCAATTGGTGGGTTTATATGACAATCTTGGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGCTAGATGCTCAGCAAAAGCAGGAGCACAATCATCAGCTGCGCGAATGGCTCACTCAGCTTAAAACTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCTTAAGAAAGTGGTCAAAGCTCATGGTAGCACCAAAGACAAGGTAAGCCACTTCTTCTCAACCTCTAATCCACTTCTCTTTCGTTACAAAATGGCCCAACAAATTAAAGATATCAGCAACAGACTAGACAAGGTAGCAGCTGATAGGCATAAATTTAGTCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTCAGTGATTCGGATGTCGTAGGAAGGAAACACGATAAAGAAAATATCATAGAACTTTTGATGCCGCAGAATTCTAATGATGATGATACAAGTCTTTCTGTTATCCCTGTTGTGGGGATTGGAGGCTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCATTGAAGATGTGGGTGTGCGTTTCTGATGACTTTGACATTAAACAACTGATTATCAAAATCATCAATTCTGTCAATGATCAAGGTGCTCCTCCTAACCAACAGAATTTGAACATGTTGGATCTGGAACAACTGCAAAATCAACTCACAAACAAACTTTCCGGTCAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGCTGCGGAATTTAATCCAAGTAAGTGTATCAGGAAGTAAAATTCTTGTGACCACACGTAGTCATTCAATTGCTTCCATGATGGGCACAGTTCCCTCTCATACTTTAGAAGGTCTTTCTGAGGAGGATTCATTGTCTCTGTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAAACATCCTCACTTAGTAAATATTGGGAGAGAAATTGTAAAAAGATGCAAGGGGGTTCCTTTGGCAGTGAGAACATTAGGTAGTCTACTATTCTCGAAATTTGAGGCCAATGAATGGGAATATGTGAGTGACAATGAAATTTGGAATTTGCCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAATTAAGTTATGATCTCATGCCGTCCTATTTGAGGCATGATTTTGCTTTCGATAATTATGAAATAACTGCGCTTTGGGGGGCACTTGGACTCATTGCACCACCAAAAAAGAACAGGACACTTGAAGATGTGGCCAATCAATATTTGCATGAACTTCTGTCCAGATCTTTTCTTCAAGATTTTTCAAACTTTGGCGCTGTTTATAATTTTCGAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGAGTATGTACATGTAAGTTCCAGTATTCAAAATATTCCAGATAATGTTCGGCATGTGTCTTTTGCTGAAAGCAATCTGTTTACCAATTTATACAACAAAAAATTGGTTGCTGTTAGAACCATACTGTTTCTAAATGATGCAGCAGAAGTCAACGTTGAAACATTACTAAATATGTGTCTGTCAAAGTTCAAATGCTTGCGTGTTTTGAAATTATGCAGTGCGACATTCGAGACTTTGTCTCGTACCATTGCTAAGTTGAAACATTTGAGATATTTGGAAATTGGCCAAAATCTCAACATTAAGAAACTCCCGGAGTCTATTTGTAAGCTCCAAAATTTGTTAATATTGAAGCTTGAGAATTGCACGGAGCTGGAAGCATTGCCCATAGGATTAAGAAAATTAATCAGTCTCAGGCATTTAGAGTTCAGCACAAAGCAATTTATTTTGCCTGACAATGAGATTGCTACTAATTTGGAGTCTATCTTCGGAGATGTGGAATTCCCTGCTCTTAAAGTGTTGAGTGTTGTTGACTGCCAGAGTCTAAAGTCTTTTCGGCTTGATGGTAAAAAATTTCCTGAATTAGAAACATTGGCTATTCATTCCTGTGGTAATTTGGACTTGGAACTGTGGAAGGTCAACCACCTTGAAGAACAAAGCCACAAGCTAAAGTTAAAAACTGTTCTATTTTCAAATTTATCACAGCTGGTGACCTTGCCTAAATGGCTTCAAGAAGCTGCCAACTCCTTACAGGGCTTGTTAATTATAGGTTGCGATAATATTCAAACACTTCCAGATTGGTTAACAACTATGAGTGACCTGAAAACTTTGATGATTGATGGTTGTCATGATTTATGTGAAAAATATCAACCCCATGTTGGAGAGTTTTGGCCCAAAATATCACACATAAAAAACATTTACATTGATGAACCAGAAGTCTAA 2448 0.3864 MAESFLFSIAESLIAKLASHAFQEASQLVGLYDNLGDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKTVFSDAEDLLDEFECQTLLKKVVKAHGSTKDKVSHFFSTSNPLLFRYKMAQQIKDISNRLDKVAADRHKFSLQIIDVDTRVVHRRDMTHSRVSDSDVVGRKHDKENIIELLMPQNSNDDDTSLSVIPVVGIGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSDDFDIKQLIIKIINSVNDQGAPPNQQNLNMLDLEQLQNQLTNKLSGQKFLLVLDDVWNEDRVKWVELRNLIQVSVSGSKILVTTRSHSIASMMGTVPSHTLEGLSEEDSLSLFVKWAFKEGEEEKHPHLVNIGREIVKRCKGVPLAVRTLGSLLFSKFEANEWEYVSDNEIWNLPQKKDDILPALKLSYDLMPSYLRHDFAFDNYEITALWGALGLIAPPKKNRTLEDVANQYLHELLSRSFLQDFSNFGAVYNFRIHDLVHDLALFVAKDEYVHVSSSIQNIPDNVRHVSFAESNLFTNLYNKKLVAVRTILFLNDAAEVNVETLLNMCLSKFKCLRVLKLCSATFETLSRTIAKLKHLRYLEIGQNLNIKKLPESICKLQNLLILKLENCTELEALPIGLRKLISLRHLEFSTKQFILPDNEIATNLESIFGDVEFPALKVLSVVDCQSLKSFRLDGKKFPELETLAIHSCGNLDLELWKVNHLEEQSHKLKLKTVLFSNLSQLVTLPKWLQEAANSLQGLLIIGCDNIQTLPDWLTTMSDLKTLMIDGCHDLCEKYQPHVGEFWPKISHIKNIYIDEPEV* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1391 815 PANTHER DISEASE RESISTANCE PROTEIN RP 6 728 IPR044974 GO:0006952
Pvu1g1391 815 CDD RX-CC_like 2 134 IPR038005 -
Pvu1g1391 815 Pfam NB-ARC domain 172 422 IPR002182 GO:0043531
Pvu1g1391 815 Gene3D - 335 424 IPR042197 -
Pvu1g1391 815 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu1g1391 815 Gene3D - 149 328 IPR027417 -
Pvu1g1391 815 Gene3D - 10 124 - -
Pvu1g1391 815 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 728 - -
Pvu1g1391 815 PRINTS Disease resistance protein signature 195 210 - -
Pvu1g1391 815 PRINTS Disease resistance protein signature 275 289 - -
Pvu1g1391 815 PRINTS Disease resistance protein signature 372 386 - -
Pvu1g1391 815 PRINTS Disease resistance protein signature 611 627 - -
Pvu1g1391 815 SUPERFAMILY L domain-like 488 799 - -
Pvu1g1391 815 Gene3D Ribonuclease Inhibitor 534 811 IPR032675 -
Pvu1g1391 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1391 Pvu-Chr1 37726212 37728725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1391 187 396 WRKY Transcription Factor Family AT5G45050 24.771 4.66e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1391 - - pvu:PHAVU_001G133600g 1614.74