Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1382 ATGGCCGAATATTTTGTCTTTGATATTGCTGAATCACTGCTAAGGAAGCTTGCTTCTTTTGTTTGTGAAGAAGCTTCTCGTGTTTATGATGTGTATGAGGATATCATAGGGATCAAAGATACTTTGTCAATTGTGAAAGGTGTGCTTTTGGATGCTGAGCATAAGAAGGAGCAGAGGCATGGGCTGCGTGAATGGCTCAGGCAGATTCAAAACGTATGCCTAGATGCTGAAGATGTGTTGGATGGACTTGAGTGCCAAAATCTGAGAAAACAAGTTCTCAAAGCTTCAGGCAGCACAAGGATGAAGGTAGACCACTTATTTTCTTCATCTAATTCTCTTGTTTTTCGTTTTAGGATGGCTCATCAAATCAAACATGTTAGGCGTAGATTTGATAAGATAGCAGCTGATGGAAACAAGTTTGGTCTTGAGAGGATTGAGGTTGATCACAGACTTGTGCAAAGGAGAGATATGAGTTATTCCCATGTTGATGCTTCAGGGGTGATTGGAAGGGAGAGTGATAGAGAAGAAATTATTAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTGTTCCCATAGTGGGTATTGGTGGGTTGGGGAAGACCACACTTGCGAAGTTGGTTTTCAATGATAAGAGAATAGATGATCTTTTCCCGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGACAGATAATTATTAAAATCATCAACTCTGCTTCTGCTTCAGCTCCAAGTATTGCTCTTGCTCACCAAGAAAACATTAACAGGTTAGATATTGAGCAGCTACAAAGTCGTCTTAGACTAAAGCTTTCTGGTCAGAAGTATTTACTCGTGTTGGATGATATATGGAATGATGATCGTGCGAAATGGATAGAGTTGAAAGATTTAATAAAAGTTGGTGCGGTGGGAAGCAAAATTGTAGTGACAACACGAAGTAACTCAATTGCTTCAATGGTGGGCACTGTTCCATCGTATGTTTTAGAAGGTCTTTCCATGGAGAATTGTTTTTCTCTGTTTGTCAAATGGGCATTTAAGGAAGGCGAAGGAAAAAACTATCCATATCTATTGGAGATTGGGAAAGAAATTGTGAAAAAATGTAGAGGGGTTCCACTGGCAGTACGAAGTTTAGGAAGTTCTCTGTTCCTAATTGTAGATTTAGAGAGGTGGGAATTTGTGAGATACCATGAAATATGGAAGATAAAACAAAACAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGACCAAATGCCTTCCTATTTAAGGCACATTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTATGGCTTTTCTAGTGCTGAAATTGTTATTCTTTGGGAGTCACTTGGATTACTTCAATCTCCAGTTGGAAATCGAAAGCTTGAGAATATTGCAAGGCAATATATTGATGAGTTACAAGCAAGATCATTGCTTGAGGATTTTGAGGACTTTGGTCACTATTACTATTTCAAAGTACATGATTTGGTACATGATCTTGCTCTGTATGTTGCCAAAGAGGAGCTTCTAATGGTAAACTCCCTTACTCGCTATATACCTGAGCAAATAAGGCATTTTTCAGTTGTTGACAATGATTCACTTAACCATGTTTTGTTCCCTAAATCCAGCAGTGTGAGAACTATATTATTTCCCCTAAAGGGAACCGGTATCGACAGTGAAACTCTTCTGCATACTTGGATAACAAGATACAAATACTTACGCTATTTAGATTTAAGTGATTCCTCTTTTGAGACACTGCCTAATTCAGTTGCTAAATTGGAGCATCTACGAACTCTCTTTTTAAATAACTGCAAAATAAAAAGATTTCCTCATTCTCTATGCAAACTCCATAATTTGAAATTTTTGTCTTTCAGAGGATGCATGGAGCTTGAAACATTGCCTAAAAGATTAGGGATGTTAGTCAGCCTTCGGAAATTGTATATAACCACAAAACAATCTGTTCTGCCTGAGGATGAATTTGCAAGCTTGAGAAATCTTCATACTTTGAGTTTTGAATATTGTGCCAACTTGAAGTTTTTGTTCAGAAGGGAACAACTCACTTTCCTTGAAGTTTTGATCGTTCAATCATGTGGGAGCCTACAGTTATTACCTCTTCATAATCTCCCTAAACTGGAGGTTCTGTTTGTATCAAGGTGTGAGATGCTAAATTTGAACTGTGAAATCCCAATCCACAGATTGAGGATGAAATTCCTGCATCTTGAGCATTGTCCGAAGCTGCATACATTGCCTCAATGGATTCAAGAATCAGTAGACACTTTGCGGACATTATTGATTTTGAATTGTGACACTCTTAAGATGTTTCCTAAGTGGCTCACAACGATGACTCGTCTTAAGATGCTCCATATTATTAACTGTCCTAAACTGTTGTGTCTCCCTAGTGAAATGCAAGGCCTCACTGCCCTTGATGATTTGACTATAGAGGGTTGTCCTGAATTGTGTCGAAAATGTGAGCCACAAAATGGTGAGTACTGGTCTTTCATCGCTCATATCAAACGCGTTTCCATTGGAGAAACAAGAAAAGGGAAACTCCTTTTTCGAATGCTGCAGCAGATGCGGTTAAGATTGCGCGATCAGTAA 2634 0.3853 MAEYFVFDIAESLLRKLASFVCEEASRVYDVYEDIIGIKDTLSIVKGVLLDAEHKKEQRHGLREWLRQIQNVCLDAEDVLDGLECQNLRKQVLKASGSTRMKVDHLFSSSNSLVFRFRMAHQIKHVRRRFDKIAADGNKFGLERIEVDHRLVQRRDMSYSHVDASGVIGRESDREEIIKLLMQPHPHGDGYGDQSVCVVPIVGIGGLGKTTLAKLVFNDKRIDDLFPLKMWVCISDDFDIRQIIIKIINSASASAPSIALAHQENINRLDIEQLQSRLRLKLSGQKYLLVLDDIWNDDRAKWIELKDLIKVGAVGSKIVVTTRSNSIASMVGTVPSYVLEGLSMENCFSLFVKWAFKEGEGKNYPYLLEIGKEIVKKCRGVPLAVRSLGSSLFLIVDLERWEFVRYHEIWKIKQNKDDILPALKLSYDQMPSYLRHIFAFFSLYPKDYGFSSAEIVILWESLGLLQSPVGNRKLENIARQYIDELQARSLLEDFEDFGHYYYFKVHDLVHDLALYVAKEELLMVNSLTRYIPEQIRHFSVVDNDSLNHVLFPKSSSVRTILFPLKGTGIDSETLLHTWITRYKYLRYLDLSDSSFETLPNSVAKLEHLRTLFLNNCKIKRFPHSLCKLHNLKFLSFRGCMELETLPKRLGMLVSLRKLYITTKQSVLPEDEFASLRNLHTLSFEYCANLKFLFRREQLTFLEVLIVQSCGSLQLLPLHNLPKLEVLFVSRCEMLNLNCEIPIHRLRMKFLHLEHCPKLHTLPQWIQESVDTLRTLLILNCDTLKMFPKWLTTMTRLKMLHIINCPKLLCLPSEMQGLTALDDLTIEGCPELCRKCEPQNGEYWSFIAHIKRVSIGETRKGKLLFRMLQQMRLRLRDQ* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1382 877 Gene3D Ribonuclease Inhibitor 526 746 IPR032675 -
Pvu1g1382 877 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Pvu1g1382 877 Gene3D - 341 425 IPR042197 -
Pvu1g1382 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 440 IPR027417 -
Pvu1g1382 877 Gene3D - 426 515 IPR036388 -
Pvu1g1382 877 Gene3D - 10 124 - -
Pvu1g1382 877 Gene3D Ribonuclease Inhibitor 747 839 IPR032675 -
Pvu1g1382 877 PANTHER DISEASE RESISTANCE PROTEIN RP 6 785 IPR044974 GO:0006952
Pvu1g1382 877 SUPERFAMILY L domain-like 504 855 - -
Pvu1g1382 877 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 785 - -
Pvu1g1382 877 CDD RX-CC_like 12 134 IPR038005 -
Pvu1g1382 877 PRINTS Disease resistance protein signature 198 213 - -
Pvu1g1382 877 PRINTS Disease resistance protein signature 281 295 - -
Pvu1g1382 877 PRINTS Disease resistance protein signature 378 392 - -
Pvu1g1382 877 PRINTS Disease resistance protein signature 718 734 - -
Pvu1g1382 877 Coils Coil 66 86 - -
Pvu1g1382 877 Gene3D - 151 335 IPR027417 -
Pvu1g1382 877 Pfam Rx N-terminal domain 11 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1382 Pvu-Chr1 37534317 37536950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1382 199 831 WRKY Transcription Factor Family AT5G45050 22.679 2.84e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1382 - - gmx:100794422 1322.38