Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1377 ATGGCCGAATATTTTGTCTTCGAAATTGCTGAATCACTGCTAGGGAAGCTTGCATCTAATCTTTATGAAGAAGTTTCTCGAGCCTTTGATCTGTATGAGGATGTGCAAGGTCTGAGAGACACCCTGTTAATTGTAAAAGGCGTGCTGTTGGACGCTGAGGAGAAGAAGGAGAAGAAGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTTTGCCTAGATGCTGAAGATGTGTTGGATGGATTTGAGAGCCAAAGCCTGAGAAAACAAGTTCTCAAAGCTTCAGGCAGCACAAGGATGAAGGTAGACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCTAGGAAAATAAAAAATGTTAGGCGTAGATTGGATAAGATAGCAGCTGATGGGAGCAAGTTTGGTCTTGAGAGGATTGATATTGATCACAGCCGTCTGCAAAGGAGAGAAATGACTTACTCTCATGTTGATGATTCAAGGGTTATAGGAAGGGACAAGAATAGGGAAGAAATTATGAAGCTTTTGATGCAACCTCACCTTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTAGGTATTGGAGGGTTGGGAAAGACCACACTAGCAAAGTTGGTGTTCAATGATAAGAGAATGGATGATCTTTTCCCGTTGAAGATGTGGGTGTGTATTTCTGATGACTTTGACATAAGACAGATAATTGTTAAAATCATCAACTCTGCTTCTGATCCAACCATTTCTGTTGTTCCTCAAGAAAGCATTGACAATTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACACAAACTTTCTTGCCAGAAGTATCTACTAGTCTTGGATGATGTATGGAATGAGGATCGTGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTTGGTGCAATTGGAAGCAAAATCATAGTGACAACACGGAGTATTTCAATTGCTTACATGATGGGGACTGTCCCCTCGTATGTTTTAGAAGGTCTTTCTGCGGAGAATTGCTTATCTCTGTTTCTCAAATGGGCATTTAGGGAAGGTGAAGAAAAAGAACACCCAAATCTAGTGGAAATTGGAAAAGAAATAGTGAAAAAGTGCGGAGGGGTTCCACTAGCACTGAAAACTTCAGGAAGTTCCCTGTTCTCAGTTTTTGATTTAGAAAGATGGGAAAATATGAGAGACCATGAGCTATGGAACCTAAAACAACAGAAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATTTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTTTGGCTTTACCAGTGCTGAAATGGCTAACTTTTGGGTCACACTTGGATTACTTCGATCAGCATTTGGAAGTCAGCAGATAGAGAATGTTGGAAAACTATATATATATGAGTTATATTCAAGATCATTTCTGGAGGACTTTGAGGACTTTGGCTCACATTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTAT 1539 0.3918 MAEYFVFEIAESLLGKLASNLYEEVSRAFDLYEDVQGLRDTLLIVKGVLLDAEEKKEKKHGLREWLRQIQNVCLDAEDVLDGFESQSLRKQVLKASGSTRMKVDHFFSSSNSLVFRFRMARKIKNVRRRLDKIAADGSKFGLERIDIDHSRLQRREMTYSHVDDSRVIGRDKNREEIMKLLMQPHLHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFPLKMWVCISDDFDIRQIIVKIINSASDPTISVVPQESIDNLDIEQLQSRLRHKLSCQKYLLVLDDVWNEDRAKWIELKDLIKVGAIGSKIIVTTRSISIAYMMGTVPSYVLEGLSAENCLSLFLKWAFREGEEKEHPNLVEIGKEIVKKCGGVPLALKTSGSSLFSVFDLERWENMRDHELWNLKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTSAEMANFWVTLGLLRSAFGSQQIENVGKLYIYELYSRSFLEDFEDFGSHYYFKLHDLVHDLSLY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1377 513 PANTHER OS08G0543100 PROTEIN 27 511 - -
Pvu1g1377 513 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu1g1377 513 CDD RX-CC_like 12 134 IPR038005 -
Pvu1g1377 513 PRINTS Disease resistance protein signature 198 213 - -
Pvu1g1377 513 PRINTS Disease resistance protein signature 279 293 - -
Pvu1g1377 513 PRINTS Disease resistance protein signature 376 390 - -
Pvu1g1377 513 PANTHER DISEASE RESISTANCE PROTEIN RP 27 511 IPR044974 GO:0006952
Pvu1g1377 513 Gene3D - 150 333 IPR027417 -
Pvu1g1377 513 Gene3D - 339 424 IPR042197 -
Pvu1g1377 513 Gene3D - 10 124 - -
Pvu1g1377 513 Pfam NB-ARC domain 194 426 IPR002182 GO:0043531
Pvu1g1377 513 Gene3D - 425 512 IPR036388 -
Pvu1g1377 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1377 Pvu-Chr1 37471184 37472722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1377 198 391 WRKY Transcription Factor Family AT5G45050 26.368 9.38e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1377 - - pvu:PHAVU_001G1326001 1025.77