Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1362 ATGGCAGATTTTGCTCCCTACGATTGTATTGCTGCTGTTAGTAGCTATAAGGACAAAAGAGGATACACAAATTCATCCTGCTCAACCGTGAGTGTTTTTGTTCATTGCTCACTGTTACCGCACATTCAAAAAGATATGTTTGTGGAAGTGGGCAAAGGCATATCACCCAACTTTCAACTACTTTTGCAATCGTTGGTGGATAGTGGAGAGTATTTAGCTTTTGTGCCAGATACTGATGAGACGAAGCTGTTGATAGATGTAGTGTCAATAAAATTTCCACTCTTGAAGCATGTTAGTAGAGTATACAAAGAAGAGGTAGAGCTGGAAACCTACATCCGCTCTGATGCTTATGGTACCTGCAATCAAGCAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAATTGTGTTTTATGAACAAGGCCCTCAATCCTTTGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCCGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGTCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTGCAGTACCAACAATGCAATACAGCATCAGTGGGTTTTTGACCCTCCAGCAAATGGTTGATTCATTCGTAATATTAGTAGCTCAGCAGTCTGACTTAAATTTCAATGCTGAAAGTCTGGACCTTCCCCTTCAAGGCTTCAATGACAGTATTTTCTTTTTGAAAAGTCCATGGACTCTGTTTAACCCTGCTCACATACGAATAGCTCCATTTCCCACCCGAGAGTATACTGATGACCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTATTGGGATTTCTCTATCCAATTTCTCGCCTAATCAGTTATTCTGTGTTCGAAAAGGAACAGAAGATTAAAGAAGGACTGTATATGATGGGCCTGAAAGATGGTATATTTCATCTGTCTTGGTTTATCACATATGCATTGCAGTTTGGAATTTCTTCTGGAATCCTTACAGCTTGCACCATGTATAATTTATTCAAGTATAGCGATAAGACACTGGTTGCAATCATGCTCTCATTCTTTATATCAACATTTTTCAAACGGGCTAAAACAGCTGTAGCTGTTGGAACTCTATCTTTTCTTGGAGCCTTTTTCCCATATTACACAGTAAATGATGAGGGAGTTTCAATAATCTTGAAGGTTATTGCTTCTTTGCTTTCACCTACTGCCTTTGCTTTGGGTTCAATCAACTTTGCTGATTACGAGCGTGCACACGTTGGACTTCGTTGGAGCAACATATGGAGGGAATCATCTGGAGTAAACTTTCTTGCATGTCTTCTGATGATGATATTTGATACACTGCTATATTGTGCAATTGGACTTTATTTTGACAAGGTTCTTCCAAGGGAGTATGGAAGGAGATACCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAAGAAAAAAGAAGTTAAAATATCTGGGAAGAATCCAGAGTCAGAAGGGAATATTTCAGGGGAATATACTTCCAGACCTGCTATTGAAGCAATAAGCTTAGAGATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTACATAAAGTGTATGCTACAGACAAAGGAGATTGCTGTGCTGTTAACTCATTACAGCTGAAACTGTATGAAAACCAGATTCTTGCCCTCCTAGGACATAATGGAGCTGGGAAAAGCACGACAATCTCAATGCTTGTTGGTCTGCTTCCTCCTACTTCTGGAGATGCTCTGGTATTCGGAAAGAATATTGTATCAGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCACAACATGATATACTATTTCCTGAATTAACGGTAAGTAGATGTATGTTTTTCTTTATTTTTTTATTTTCTGTATTGTGA 1899 0.3886 MADFAPYDCIAAVSSYKDKRGYTNSSCSTVSVFVHCSLLPHIQKDMFVEVGKGISPNFQLLLQSLVDSGEYLAFVPDTDETKLLIDVVSIKFPLLKHVSRVYKEEVELETYIRSDAYGTCNQARNCSNPKIKGAIVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSISGFLTLQQMVDSFVILVAQQSDLNFNAESLDLPLQGFNDSIFFLKSPWTLFNPAHIRIAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFGISSGILTACTMYNLFKYSDKTLVAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSIILKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLACLLMMIFDTLLYCAIGLYFDKVLPREYGRRYPWSFIFQKDFWRKKKEVKISGKNPESEGNISGEYTSRPAIEAISLEMKQQELDGRCIQIRNLHKVYATDKGDCCAVNSLQLKLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHDILFPELTVSRCMFFFIFLFSVL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1362 632 Pfam ABC-2 family transporter protein 173 454 - -
Pvu1g1362 632 Pfam ABC transporter 545 619 IPR003439 GO:0005524
Pvu1g1362 632 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 69 626 - -
Pvu1g1362 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 629 IPR027417 -
Pvu1g1362 632 Gene3D - 510 627 IPR027417 -
Pvu1g1362 632 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 69 626 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1362 Pvu-Chr1 37161671 37179976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1362 547 613 Calmodulin-binding Proteins AT2G36910 36.765 5.36e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1362 K05643 - pvu:PHAVU_001G131200g 1270.37