Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1361 ATGGCTTATTTGTTGGTGGGCCTTGCTGATAAAATCAACAGTATTGTGAGAACTCTTTCTGGTGGCATGAAGAGGAAATTGTCACTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAATCCTTGATGAACCTACTAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGAAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCAGATGAACTAGGTGACAGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGTTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTAACCCTTGTGAAGTCAGCTCCCACTGCTTCTATTGCTAGTGATATAGTATACCGTCATGTTCCATCTGCAACATGTGTAAGCGAGGTTGGAACAGAGATTTCTTTCAGGCTTCCAATGACATCCTCATCAGCCTTTGAGAGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCAGTTTTGAACATGGAATTGAGTGGCAATGGTGAAAAGGAGAATCTTGGTATTGAAAGCTATGGTATATCTGTAACAACCCTGGAGGAGGTATTTTTAAGAGTTGCAGGATGTGATGATGATGAGGTTGAATGCTTTGAAGAAAATAAGCATTCTCTGATATCTGACTCTGTGGCTTCACTTCCTACTAATGATGATCCTTCCACAAAAATAAGTTATCTTAAAACTTTTGGAAATTATAAGAGGATTCTGGGTTTCATGGCTACCATGTTGGGAAGAGCTTGTCGCTTAATTTTTGCTACATTTCTTAGTTTTATCAGCTTCTTGGGTATGCAGTGCTGTAGTTGCTGTCTCATTACTAGGTCAACATTTTGGCAACATTTTAAAGCCTTATTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTAATAATTCCTACTCTCTTCCTGTTTGTTGGTCTTCTATTTCTTAAGCTCAAGCCACATCCTGATCAGCAATCACTGACCCTTTCAACTTCTCACTTTAATCCTCTATTGAGTGGCGGGGGCGGGGGAGGTCCAATTCCATTTAATCTATCTTTTCCAATTACTGAAAAGGTAGCACAAAATATCATGGGAGGTTGGATACAGAAGTTGAAGTCGAGCTCGTACAGATTCCCTAATTCAGAGAAGGAATTGGCTGATGCAGTGGAAGTGGCAGGACCAACTCTGGGACCCGCTCTACTTTCTATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAGTAATGATGGAAGCTTAGGATACACTGTATTACACAACTGTTCCTGTCAACATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCTATTCTTAGGCTTGCAACTCAAGACACAAATATGACAATTCGGACACGCAACCACCCTTTGCCAACGACACAAAGCCAGCGCTTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAGTTATTGTCAACATTGCTTTCTCTTTTATACCTGCCTCGTTTGCCGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCTATCCTGTCATATTGGGCTTCTACATATATTTGGGACTTTGTGGGCTTCTTGTTTCCAGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGAACAGTTTGTCGGAGGCGTTTCTTTGTTACCAACAATCCTCATGCTATTGGAATATGGACTTGCAATTGCATCATCAACCTATTGCCTTACATTTTTCTTTTTTGACCACACCATGGCTCAGAACGTGGTTCTGCTGATCCACTTTTTCACCGGATTGATACTAATGGTTATCTCATTCATTATGGGACTCATGACATCAACAATGAGTACCAATTCTTTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCGTTAGCTCTTCTGCGGCAAGGCATGAAAGATAAAACAAGTGATGGAGTGTTTGATTGGAATGTTACTGGGGCTTCCATCTGTTATCTTGCTGTTGAGAGCTTTAGTTATTTTCTGTTGACACTTGCACTTGAAATTTTACCTTCTATCAACTTGACTTCATTCATGGTCAAGAAGTGGTGGGAAAAAATTAATATCTTCCGGCATGATAGTCCTTATTTGGAACCTCTGTTGGAACCTTCTTCCGAAACTGTTGTTATGGACTTTGATGAAGATGTAGATGTAAACACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGATAATTCCATTATCTACCTGCGCAATCTTCGTAAGGTATATTTTGAGGAGAAGCATCATGGAAGAAAGGTTGCAGTAGATTCTTTAACTTTCTCAGTCCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCAAAGGCTGCTCGTCGATATATTGGATATTGCCCACAATTTGATGCTCTATTGGAATACTTAACTGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTTTGCAATGGAAAAT 2709 0.3957 MAYLLVGLADKINSIVRTLSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIASDIVYRHVPSATCVSEVGTEISFRLPMTSSSAFERMFREIEGCMKKPVLNMELSGNGEKENLGIESYGISVTTLEEVFLRVAGCDDDEVECFEENKHSLISDSVASLPTNDDPSTKISYLKTFGNYKRILGFMATMLGRACRLIFATFLSFISFLGMQCCSCCLITRSTFWQHFKALFIKRAISARRDHKTIIFQLIIPTLFLFVGLLFLKLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSFPITEKVAQNIMGGWIQKLKSSSYRFPNSEKELADAVEVAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQSNDGSLGYTVLHNCSCQHAAPTFINLMNSAILRLATQDTNMTIRTRNHPLPTTQSQRLQRHDLDAFSAAVIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSILSYWASTYIWDFVGFLFPASFAIVLFYIFGLEQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFIMGLMTSTMSTNSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFSYFLLTLALEILPSINLTSFMVKKWWEKINIFRHDSPYLEPLLEPSSETVVMDFDEDVDVNTERNRVLSGSLDNSIIYLRNLRKVYFEEKHHGRKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARRYIGYCPQFDALLEYLTVQEHLELYARIKGVPDFAMEN 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1361 903 Pfam ABC-2 family transporter protein 316 718 - -
Pvu1g1361 903 Gene3D - 780 903 IPR027417 -
Pvu1g1361 903 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 639 897 - -
Pvu1g1361 903 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 642 - -
Pvu1g1361 903 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 639 897 IPR026082 GO:0016021|GO:0055085|GO:0140359
Pvu1g1361 903 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 642 IPR026082 GO:0016021|GO:0055085|GO:0140359
Pvu1g1361 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 897 IPR027417 -
Pvu1g1361 903 Gene3D - 2 149 IPR027417 -
Pvu1g1361 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 122 IPR027417 -
Pvu1g1361 903 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 17 76 IPR003959 GO:0005524|GO:0016887
Pvu1g1361 903 Pfam ABC transporter 810 886 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1361 Pvu-Chr1 37127683 37144724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1361 19 161 Calmodulin-binding Proteins AT2G36910 26.207 6.84e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1361 K05643 - gmx:100803263 1652.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1361 1 37127683 37144724 Pvu1g1361 1 37127683 37144724 ECH