Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1357 ATGGAATTGAAGGTGCTGACACAGATGCAAGTGACCCTGCTGCTGCTGCTGATTGTGTTGACAAGAACAGGAACTGCAGCAGATGACCAAGACCTGCTCGGCTGCCCGAACAAGTGCGGAGATGTTTCGATTCCATACCCCTTTGGCGTAGGTGTGTCAGATATCACGGGAAAGAACTGTTACTTGGAGAAAAACTTGGAACTCAATTGCACTGACTCCATTCTATACGCAGGTAACGTCGAAGTTCAGAACATAACCCTCGTCGGTCAAATGGAGATGAATTTCTTCGTCTCCAGTATCTGCAAAATCAACATTTCTAACGGAAAAAATAAATCCAACACACCCACACTCCAAACTGCATCCTTCACTATTTCCAGCACGGACAACAAGTTCGTGAGTATAGGCTGCGACACGTACGGGTATCTCAACAGTTACGTCGACCAAGCTAAATACTCAACAGGGTGCTTGACAAGATGTGACAAGAATGACCCGAATGTGAAAAATATGCAGAGAAATGATGGGAAATGTTCGGGCATAGGGTGCTGCCAGGTGGATATACCTCCTGGAATGAAGAACATCAGTATACAAGCATCCTCCTTTGATGATTTCAAATCCTTTTCGGGTAACAGCTGCAGCGTTTCGTTTGTGGTGAAAAATGGCGGGTACAGTTTCAAGATGGATCATTTGAAACACATCCCATTCGATAAGGCTCCCATGGTGGTTGATTGGACTGTTGGAGATGGTGCCTGTAACGTTTCCAAGAATAACGACAACTATGCGTGCACCAGTAATCATAGCGTTTGCGAGGACCCACCCTATGCCAATCGAAATGGCTACCAATGCAAATGTAAACAAGGTTTTGTGGGCAACCCTTACCTTCGCACTGGTTGCACAGACTTTTTGGAATGTACAACGGGCAATCACAATTGCGCAAGAGATGAGTATTGTCATGATATTCCTGGCTCTTTTGAATGTTTATGTCCTGTTGGACTAACCGGAAAAGCAACAAACGGAGGTGGAGGATGCCAACCAAAAAAGGAGGATGATGCATTTACCAAGATCGTCATTGGATCAGGTGTAGGATTAATTGCTCTATTTGTGGGGGTTTCTTGGCTGTACTTGATGCACCAGAAAAGGAGACTGCTCAAATTGAAGGAAAAGTTCTTTCAGCAGAATGGGGGCATCATTCTAAGACAGAAACTCTCTGCAAGAGGAGAAACGTCTCAATCCGCCACAATTTTCAGTGTTGAGGAACTAAAGAAAGCCACCAACAATTTTGATGAGAGTTTAATCATTGGTAGAGGAGGTTTTGGAACAGTTTTCAAAGGAGTTCTCTTAAATAACGAAGTTGTGGCCATCAAAAAGTCCAAAATAATGGACTCGAGCCAAGTGGAGCAATTCATCAACGAGGTCATTATACTGTCACAAATTAATCACAGGAATGTGGTTAAACTCTTTGGTTGTTGTTTAGAGACAGAAGTTCCTTTATTGGTCTATGAATTTGTTGAAAATGGCACCCTTTTTGATTATTTGCATAAGCAAGGCCAGGTGCCTAATGTAAGTTGGAAAACGCGTTTAAGGATTGCTACAGAAGCAGCTGGAGCTTTGTCATATCTACACTCGGAAGCTTCCATACCCATCATCCACAGAGATGTGAAAACTGCTAACATACTCTTAGATGAAAGTAACACAGCCAAAGTGTCTGACTTTGGAGCTTCACGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAGGCCAATTGACTGAAAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTAGAACTTCTAAGTGGGGAGGAACCTTTCTCTTCTCACAAGACAGAAGAGAAACGAAGTCTCACATTTCATTTTCTTAGTAGCTTGGAAAAGGATTCCCTGATTGATGTTCTTGAGAATGATATTCTGGATGAAGAAAATAAGCAGGAGATTATGGAGGTTGCTATTCTTGCTGCCAGGTGCTTGAAACTTAGAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGACAATGGAATTGGAGGGAATAAGGCATATGGACAAACACCCTTGGACCAATACAAGCCAAGATTTTGAGGAGAGTCAATACTTGCTTTCTGAGCCACAAAGCACTCCTGAACATGGTTACAGTAGTGGCCAACAAAGTACTGGATTTGATAGCTTGAGAGAACTTGAATTAATTAACTTTGGTAATGGGAGATGA 2271 0.428 MELKVLTQMQVTLLLLLIVLTRTGTAADDQDLLGCPNKCGDVSIPYPFGVGVSDITGKNCYLEKNLELNCTDSILYAGNVEVQNITLVGQMEMNFFVSSICKINISNGKNKSNTPTLQTASFTISSTDNKFVSIGCDTYGYLNSYVDQAKYSTGCLTRCDKNDPNVKNMQRNDGKCSGIGCCQVDIPPGMKNISIQASSFDDFKSFSGNSCSVSFVVKNGGYSFKMDHLKHIPFDKAPMVVDWTVGDGACNVSKNNDNYACTSNHSVCEDPPYANRNGYQCKCKQGFVGNPYLRTGCTDFLECTTGNHNCARDEYCHDIPGSFECLCPVGLTGKATNGGGGCQPKKEDDAFTKIVIGSGVGLIALFVGVSWLYLMHQKRRLLKLKEKFFQQNGGIILRQKLSARGETSQSATIFSVEELKKATNNFDESLIIGRGGFGTVFKGVLLNNEVVAIKKSKIMDSSQVEQFINEVIILSQINHRNVVKLFGCCLETEVPLLVYEFVENGTLFDYLHKQGQVPNVSWKTRLRIATEAAGALSYLHSEASIPIIHRDVKTANILLDESNTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSGQLTEKSDVYSFGVVLVELLSGEEPFSSHKTEEKRSLTFHFLSSLEKDSLIDVLENDILDEENKQEIMEVAILAARCLKLRGEERPSMKEVTMELEGIRHMDKHPWTNTSQDFEESQYLLSEPQSTPEHGYSSGQQSTGFDSLRELELINFGNGR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1357 756 Gene3D Phosphorylase Kinase; domain 1 394 501 - -
Pvu1g1357 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Pvu1g1357 756 Pfam Calcium-binding EGF domain 299 332 IPR001881 GO:0005509
Pvu1g1357 756 Gene3D Transferase(Phosphotransferase) domain 1 502 722 - -
Pvu1g1357 756 SUPERFAMILY Protein kinase-like (PK-like) 406 697 IPR011009 -
Pvu1g1357 756 Gene3D Laminin 250 339 - -
Pvu1g1357 756 Pfam Protein kinase domain 430 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1357 756 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 316 327 IPR000152 -
Pvu1g1357 756 ProSiteProfiles Protein kinase domain profile. 426 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1357 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 725 IPR045274 GO:0007166
Pvu1g1357 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 28 725 - -
Pvu1g1357 756 ProSiteProfiles EGF-like domain profile. 299 337 IPR000742 -
Pvu1g1357 756 Pfam Wall-associated receptor kinase galacturonan-binding 35 89 IPR025287 GO:0030247
Pvu1g1357 756 CDD STKc_IRAK 432 699 - -
Pvu1g1357 756 SMART egfca_6 299 343 IPR001881 GO:0005509
Pvu1g1357 756 SMART serkin_6 426 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1357 756 MobiDBLite consensus disorder prediction 714 744 - -
Pvu1g1357 756 SMART egf_5 302 343 IPR000742 -
Pvu1g1357 756 SMART egf_5 249 298 IPR000742 -
Pvu1g1357 756 SUPERFAMILY EGF/Laminin 299 334 - -
Pvu1g1357 756 ProSitePatterns Protein kinases ATP-binding region signature. 432 455 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1357 Pvu-Chr1 37016380 37019136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1357 35 756 Receptor kinase-like Gene Family AT1G21230 43.673 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu1g1357 Pkinase 6.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1357 - - gmx:100819535 1002.66