Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1352 ATGGAGAATGGTACGATAGATAAGACTCGTGATTTCAATATGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGCAGACGCTATATGGCCACTCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGTATATCGAGCGAGCCTACAGAGAGAGAACTCATTTCTTGCTTGAGAAATGGTCTGATACTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTACCCAAAGTTGTGGTTGTGGATAATCAAATGTCTTCACAATCACTTACCTGGGATTCTCAGCCATTGCCCGCCTATCAGTATTTTGTAAATTTACGCAACTTTCTTGTCGCAATGGAGGAATTAAATCTTCCGGCTTTTGAAGCTTCTGATCTTGAAAGGGATACTCTAGGGAAGGGATCGGCAGCCAAAGTGGTTGATTGCATTTTGGCACTTAAATCGTTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATACAACAAATACATAAAATCTCCTTTACCTATGAGAATGCTTTCAAGAGCTGCAGCTGCACTCCCCTTTGATGCTAGTAGGCACTTGGATTTGTCTGCCACAATGGAAAAGATGCCTCCCGCTGAGAGTAATATTTTGAATCGAGAAGAAATTGTGGAATTACTTGCCAAGCAACTGGTTGATCGTATGTTTGATGCCAAAGAAAATATTGATGGAAACATCATTGCTTCTCTCCGTAAAGAACACCTGGTAGTGGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGGGGAACAACCACCAACAAGGTTTCATGAGGATTTTGTGAAAGAAGAGGGGTTATCACATCATTCCACATCTACACAATCAAATGCTTTATCGGCTCCTGACAATTCTAAGCGTTGCCAAGCTTGTCCCGGAAAATGCAAATGCAACCAGGAGCATCTTTTAAACATGCAGGAAAAAGAACTTGTGGATCTCAAGGCTTTGAAGTTGAAAGTTAAGAAAGAGTTTGAAGATATGCAATCTCAGTTTCAAGGATTTTTTAATGACATTGGAAGTCAAATACAGGAGATGTCAACTAAAGCTATTGGATATAGCAGAGTAGTAGAAGAGAATAGGAAACTATACAATATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCATCATTCCAGGCCGAATCAAGCAATATTGTTGATTTCATTGGGGAAGATGGTTCTCTATTCATTTTAGATCCATCAAAAACACTGAAAGATGGAAGGAAACTTTTTCAGTTTAATCGTGTTTTTGGTCCAACAGCTGACCAAGATGAGGTTTACAAGGATACTCAGCCATTAATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTTGCTTATGGTCAAACTGGTTCAGGAAAGACTCACACCATGAGTGGTCCCTCAGGTGGAACATTTAAGGATATGGGAATCAATTATCTGGCTCTTACTGATCTGTTTCAAATGTCTAATGAAAGAAATGACATCATAAACTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTTAGAGATCTACTTGCAGAGGACAAAACTGACAACAAATATCCTTTTCATATTCATTATTCCATACATTTCCACACTTCCGTTGATCTTAATATTTGCAACTGCAATGATGATGGGTTGAGACTTCCAGATGCCAAATTGCGTCCTGTGAATTCTACAGCTGATGTTATGACCCTCATGAAACTTGGTGAGGTTAATCGCGCTGTCAGTTCGACTGCAATGAACAACAGGAGTAGTCGTTCCCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAACTCCATTCGCAGTTGCTTGCACTTGGTAGACCTAGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAATCTCTTTCTTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTACAGGAACAGCAAACTCACTCTTCTTTTGCAAGACTCCTTAGGTGGACATGCAAAAACATTGATGTTTGCTCATGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTTTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTGGGGGCAGCCCGTTTGAACAAAGAAAGCAGTGAGGTTATGCAACTAAAAGAACAGGTTGAGAGCCTTAAGATTGCATTGGCAACCAAGGAAACTCAGAGAATGTTCCAAAGAAACAGAGAGCAGTACACTCCGTTAGAGAAGCCAACACACTCTGAGAAAACTCCATTGCCCTCTCGAAGACTTAGCATTGAGAACTGCAGTGCCGTAAAGACCGATAAATGTGTGAGTCGTGAGGATAGAAGTGGAGCCAAATCACCACTTTTGTTACCTCGTTCCAGAAGATTAAGTTTGGAAGGTCCAAAAGCTATCAAGAAAGATGGTCTGCAATATGAGCCAGTATCTATGCAGAAATATCGCTCAATGCAAGATGAAGAGGCAGTGTCAAAACTAAATGGCCAGTTCAGCAGTGGCAATTCCAGGTCAGAGTTGCACCCCAAAACCCCTCGAAGTCCTATAAGCATTTCCTATCAAAAGAGATTGATAAAATTAAATGACGGGATGCAAGTTCATCCTATTAAACTGCCTCAAACACCTGAACCACCTGTTCGGGATGTACATGCCTCTAAGGTGATGGGTAGCACAAATGGCAAAGGATCCCAGATAAGAAGATCCTTGAGAACAATTGGGAAACTGATCAATGGTGGCCCTGATAAGAGGAGCCAACATATGGTTGAAGTCAAGTCACCAATGGGCAGTGGCCATAGAAATCATGTAAAATCACCCATCAGGGGCACTGGCTATACAAATAGTGTAAAGTCACCAATTTCAGCTGTTGAGAAAACAAATAGGAGGAAATCTTTAACAGGGATTCAAGCACCACTGCCAAACAACTCACGTAGATCTTCACTTGGAGGAAAGCCAGTAGTAGCATTTGAGGACAAGGAGACAAATGCTAGAACTCCTCCAAATCCTCATTCAGACACCAAGGCTTCAAAACGGTGGCTGTAG 3114 0.4117 MENGTIDKTRDFNMASRKAEEAACRRYMATQWLESQVGPLGISSEPTERELISCLRNGLILCNAINKIHPGAVPKVVVVDNQMSSQSLTWDSQPLPAYQYFVNLRNFLVAMEELNLPAFEASDLERDTLGKGSAAKVVDCILALKSFQELKQMNNQNGYNKYIKSPLPMRMLSRAAAALPFDASRHLDLSATMEKMPPAESNILNREEIVELLAKQLVDRMFDAKENIDGNIIASLRKEHLVVDPIKVFNQIMACCNGEQPPTRFHEDFVKEEGLSHHSTSTQSNALSAPDNSKRCQACPGKCKCNQEHLLNMQEKELVDLKALKLKVKKEFEDMQSQFQGFFNDIGSQIQEMSTKAIGYSRVVEENRKLYNMVQDLKGNIRVYCRIRPSFQAESSNIVDFIGEDGSLFILDPSKTLKDGRKLFQFNRVFGPTADQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTFKDMGINYLALTDLFQMSNERNDIINYDIYVQMVEIYNEQVRDLLAEDKTDNKYPFHIHYSIHFHTSVDLNICNCNDDGLRLPDAKLRPVNSTADVMTLMKLGEVNRAVSSTAMNNRSSRSHSVLTVHVHGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKESSEVMQLKEQVESLKIALATKETQRMFQRNREQYTPLEKPTHSEKTPLPSRRLSIENCSAVKTDKCVSREDRSGAKSPLLLPRSRRLSLEGPKAIKKDGLQYEPVSMQKYRSMQDEEAVSKLNGQFSSGNSRSELHPKTPRSPISISYQKRLIKLNDGMQVHPIKLPQTPEPPVRDVHASKVMGSTNGKGSQIRRSLRTIGKLINGGPDKRSQHMVEVKSPMGSGHRNHVKSPIRGTGYTNSVKSPISAVEKTNRRKSLTGIQAPLPNNSRRSSLGGKPVVAFEDKETNARTPPNPHSDTKASKRWL* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1352 1037 MobiDBLite consensus disorder prediction 795 815 - -
Pvu1g1352 1037 ProSiteProfiles Kinesin motor domain profile. 380 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 Coils Coil 311 331 - -
Pvu1g1352 1037 Coils Coil 727 754 - -
Pvu1g1352 1037 MobiDBLite consensus disorder prediction 842 872 - -
Pvu1g1352 1037 SUPERFAMILY Calponin-homology domain, CH-domain 19 158 IPR036872 -
Pvu1g1352 1037 Gene3D Kinesin motor domain 322 722 IPR036961 -
Pvu1g1352 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 754 IPR027417 -
Pvu1g1352 1037 MobiDBLite consensus disorder prediction 848 872 - -
Pvu1g1352 1037 Pfam Calponin homology (CH) domain 24 146 IPR001715 GO:0005515
Pvu1g1352 1037 PANTHER KINESIN-LIKE PROTEIN KIN-14L 7 1024 - -
Pvu1g1352 1037 Pfam Kinesin motor domain 386 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 SMART ch_5 25 147 IPR001715 GO:0005515
Pvu1g1352 1037 MobiDBLite consensus disorder prediction 950 1037 - -
Pvu1g1352 1037 MobiDBLite consensus disorder prediction 964 1005 - -
Pvu1g1352 1037 ProSiteProfiles Calponin homology (CH) domain profile. 23 149 IPR001715 GO:0005515
Pvu1g1352 1037 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 1024 - -
Pvu1g1352 1037 PRINTS Kinesin heavy chain signature 453 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 PRINTS Kinesin heavy chain signature 621 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 PRINTS Kinesin heavy chain signature 670 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g1352 1037 Gene3D - 8 165 IPR036872 -
Pvu1g1352 1037 SMART kinesin_4 378 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1352 Pvu-Chr1 36916261 36924045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1352 310 720 Calmodulin-binding Proteins AT5G65930 39.467 1.42e-68 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1352 K10406 - gmx:100786642 1593.94